fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus	Common name	Short description
AT2G45120		C2H2-like zinc finger protein (.1)

>AT2G45120.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI

Name	Recognition sequence	Cut positions
BglII	A\|GATCT	70, 447, 787
PstI	CTGCA\|G	92

Click here to view TAIR data

>AT2G45120.1 length:945

ATGGAGAGAT ACAAGTGTAG ATTTTGCTTC AAGAGCTTCA TCAATGGAAG	50
AGCTTTAGGT GGTCACATGA GATCTCACAT GCTTACTCTT TCTGCAGAAC	100
GTTGTGTAAT AACTGGTGAA GCAGAAGAAG AAGTAGAGGA ACGGCCGAGT	150
CAACTCTGTG ACGACGACGA CGATACCGAG TCCGATGCTT CTTCTTCTTC	200
TGGTGAGTTT GATAATCAAA AGATGAATCG TCTTGATGAT GAATTGGAGT	250
TTGATTTCGC TGAAGACGAC GACGTTGAAA GTGAAACCGA GTCGTCCAGG	300
ATTAACCCAA CTCGGCGACG ATCTAAACGA ACTCGGAAAC TTGGATCGTT	350
TGATTTCGAC TTTGAGAAGC TAACAACGAG CCAACCCAGT GAGTTAGTGG	400
CCGAGCCAGA GCATCACAGC TCAGCTTCTG ATACAACAAC GGAGGAAGAT	450
CTCGCCTTTT GTCTCATTAT GCTGTCCAGA GACAAATGGA AGCAACAGAA	500
GAAGAAGAAG CAACGTGTAG AAGAAGATGA GACAGATCAT GACAGTGAAG	550
ATTACAAATC AAGCAAGAGC AGAGGGAGAT TCAAGTGTGA GACTTGTGGT	600
AAAGTGTTTA AATCGTATCA AGCATTAGGA GGACACAGAG CAAGCCACAA	650
GAAGAACAAG GCATGCATGA CGAAAACAGA GCAAGTTGAA ACAGAGTACG	700
TTCTTGGAGT AAAGGAGAAG AAAGTTCATG AATGTCCGAT CTGTTTTAGG	750
GTTTTTACTT CAGGGCAAGC ACTTGGAGGT CATAAGAGAT CTCACGGAAG	800
TAACATCGGA GCAGGAAGAG GATTGTCAGT AAGTCAAATT GTCCAAATCG	850
AAGAAGAAGT ATCAGTGAAA CAGAGGATGA TTGATCTTAA TCTTCCTGCA	900
CCTAATGAAG AAGATGAAAC TTCTTTGGTG TTTGATGAAT GGTGA	950

>AT2G45120.1 longest ORF length:314

MERYKCRFCF KSFINGRALG GHMRSHMLTL SAERCVITGE AEEEVEERPS	50
QLCDDDDDTE SDASSSSGEF DNQKMNRLDD ELEFDFAEDD DVESETESSR	100
INPTRRRSKR TRKLGSFDFD FEKLTTSQPS ELVAEPEHHS SASDTTTEED	150
LAFCLIMLSR DKWKQQKKKK QRVEEDETDH DSEDYKSSKS RGRFKCETCG	200
KVFKSYQALG GHRASHKKNK ACMTKTEQVE TEYVLGVKEK KVHECPICFR	250
VFTSGQALGG HKRSHGSNIG AGRGLSVSQI VQIEEEVSVK QRMIDLNLPA	300
PNEEDETSLV FDEW	350