fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G45160 ATHAM1, LOM1 LOST MERISTEMS 1, ARABIDOPSIS THALIANA HAIRY MERISTEM 1, GRAS family transcription factor (.1)

>AT2G45160.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 639, 645, 1145
BglII A|GATCT 120, 1726
HindIII A|AGCTT 530
HpaI GTT|AAC 1087
KpnI GGTAC|C 250
PvuII CAG|CTG 811
SmaI CCC|GGG 396, 423
SpeI A|CTAGT 916


Click here to view TAIR data

>AT2G45160.1 length:1923
ATGCCCTTAT CCTTTGAAAG GTTTCAAGGG GAGGGGGTGT TTGGTTTATC 
50
TTCTTCTTCT TTCTATTCAG ATTCTCAGAA AATCTGGTCC AATCAAGACA 
100
AAACCGAAGC AAAACAAGAA GATCTTGGTT ATGTTGTCGG TGGTTTTTTA 
150
CCGGAGCCGA CGTCTGTTCT CGACGCTCTA AGAAGTCCTA GTCCTCTCGC 
200
TTCTTATTCT TCTACCACCA CCACGCTGTC TTCCTCTCAC GGCGGCGGTG 
250
GTACCACCGT CACCAACACC ACCGTAACCG CCGGTGATGA TAACAATAAC 
300
AATAAATGTA GTCAGATGGG TTTGGATGAT CTTGACGGTG TTCTCTCTGC 
350
TTCTTCTCCT GGTCAAGAGC AGAGTATCTT GAGACTTATC ATGGACCCGG 
400
GTTCTGCCTT CGGTGTTTTC GACCCGGGTT TCGGATTCGG GTCTGGTTCC 
450
GGGCCTGTGT CTGCTCCGGT GAGTGATAAT TCGAATCTTC TGTGTAACTT 
500
CCCGTTTCAA GAGATTACGA ATCCAGCAGA AGCTTTGATC AATCCTTCAA 
550
ATCATTGCCT GTTCTATAAT CCTCCGTTAT CTCCACCGGC TAAACGGTTT 
600
AATTCCGGAT CTCTTCATCA ACCCGTTTTC CCTTTATCGG ATCCGGATCC 
650
GGGTCACGAC CCGGTTCGTC GTCAACATCA GTTTCAGTTT CCGTTTTATC 
700
ACAACAACCA GCAACAACAA TTCCCGTCGT CTTCTTCTTC CACGGCGGTG 
750
GCTATGGTTC CGGTTCCGTC GCCGGGAATG GCCGGCGATG ACCAGTCAGT 
800
CATCATCGAG CAGCTGTTCA ACGCGGCGGA GCTAATCGGA ACCACCGGAA 
850
ACAACAACGG CGACCACACC GTTCTCGCGC AAGGGATATT GGCGCGGCTC 
900
AATCACCATC TCAACACTAG TAGTAACCAC AAGTCTCCGT TTCAAAGAGC 
950
AGCTTCTCAC ATCGCTGAAG CTCTCCTCTC ACTCATCCAC AACGAATCAT 
1000
CACCACCGTT AATCACGCCG GAGAATCTGA TTCTCCGAAT CGCCGCTTAC 
1050
AGATCCTTCT CCGAAACCTC GCCGTTTCTC CAATTCGTTA ACTTCACAGC 
1100
GAATCAATCG ATTCTTGAGT CCTGCAACGA ATCAGGGTTT GATCGGATCC 
1150
ACATTATCGA TTTCGACGTT GGATATGGAG GACAATGGTC GTCTCTAATG 
1200
CAAGAACTCG CTTCCGGAGT TGGAGGAAGA AGAAGAAACA GAGCATCGTC 
1250
TCTGAAATTA ACAGTCTTTG CTCCTCCACC TTCTACAGTC TCCGACGAGT 
1300
TCGAGCTTCG TTTCACAGAG GAAAATCTCA AAACATTCGC CGGAGAAGTC 
1350
AAGATTCCTT TCGAAATCGA GTTACTAAGC GTAGAGCTTC TTCTAAACCC 
1400
AGCTTATTGG CCACTCTCTC TACGTTCATC GGAAAAAGAA GCAATCGCAG 
1450
TGAATCTTCC AGTAAACTCC GTCGCCTCCG GTTACCTTCC GTTAATCCTC 
1500
CGATTCCTTA AACAACTATC ACCAAACATC GTCGTTTGCT CAGACAGAGG 
1550
ATGTGACCGT AACGACGCGC CGTTTCCAAA CGCAGTGATT CATTCGCTTC 
1600
AATACCACAC TTCTCTGCTT GAGTCTCTTG ATGCTAATCA GAACCAGGAC 
1650
GATTCGAGTA TCGAGAGGTT TTGGGTTCAA CCATCGATAG AGAAGCTGTT 
1700
GATGAAACGA CACCGTTGGA TTGAAAGATC TCCACCGTGG AGAATCTTGT 
1750
TTACACAATG TGGGTTTTCT CCGGCGAGTT TGAGTCAGAT GGCGGAAGCT 
1800
CAGGCGGAGT GTTTGTTGCA GAGAAATCCG GTGAGAGGGT TTCACGTTGA 
1850
GAAAAGGCAG TCTTCACTTG TCATGTGTTG GCAAAGGAAA GAACTTGTTA 
1900
CTGTCTCTGC TTGGAAATGT TAG
1950

>AT2G45160.1 longest ORF length:640
MPLSFERFQG EGVFGLSSSS FYSDSQKIWS NQDKTEAKQE DLGYVVGGFL 
50
PEPTSVLDAL RSPSPLASYS STTTTLSSSH GGGGTTVTNT TVTAGDDNNN 
100
NKCSQMGLDD LDGVLSASSP GQEQSILRLI MDPGSAFGVF DPGFGFGSGS 
150
GPVSAPVSDN SNLLCNFPFQ EITNPAEALI NPSNHCLFYN PPLSPPAKRF 
200
NSGSLHQPVF PLSDPDPGHD PVRRQHQFQF PFYHNNQQQQ FPSSSSSTAV 
250
AMVPVPSPGM AGDDQSVIIE QLFNAAELIG TTGNNNGDHT VLAQGILARL 
300
NHHLNTSSNH KSPFQRAASH IAEALLSLIH NESSPPLITP ENLILRIAAY 
350
RSFSETSPFL QFVNFTANQS ILESCNESGF DRIHIIDFDV GYGGQWSSLM 
400
QELASGVGGR RRNRASSLKL TVFAPPPSTV SDEFELRFTE ENLKTFAGEV 
450
KIPFEIELLS VELLLNPAYW PLSLRSSEKE AIAVNLPVNS VASGYLPLIL 
500
RFLKQLSPNI VVCSDRGCDR NDAPFPNAVI HSLQYHTSLL ESLDANQNQD 
550
DSSIERFWVQ PSIEKLLMKR HRWIERSPPW RILFTQCGFS PASLSQMAEA 
600
QAECLLQRNP VRGFHVEKRQ SSLVMCWQRK ELVTVSAWKC 
650