fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G45420 LBD18, ASL20 LOB domain-containing protein 18 (.1)

>AT2G45420.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 321
HindIII A|AGCTT 241
XbaI T|CTAGA 781


Click here to view TAIR data

>AT2G45420.1 length:789
ATGAGCGGTG GTGGGAACAC AATCACTGCC GTGGGAGGCG GAGGTGGTGG 
50
TTGTGGTGGA GGAGGCAGCA GTGGGGGAGG AGGAAGTAGT GGCGGTGGTG 
100
GTGGTGGGCC ATGTGGTGCT TGTAAGTTTC TAAGGAGGAA GTGTGTGCCG 
150
GGATGTATAT TTGCACCGTA CTTTGACTCC GAGCAAGGAT CGGCTTATTT 
200
TGCGGCGGTG CATAAAGTGT TCGGAGCCAG TAACGTCTCG AAGCTTCTAT 
250
TACACATACC GGTTCATCGA AGGTCCGATG CTGTCGTAAC AATTTGCTAT 
300
GAAGCTCAGG CTAGGATAAG GGATCCTATC TACGGTTGCG TCGCTCACAT 
350
CTTTGCTCTT CAGCAACAGG TGGTGAATCT ACAGGCAGAA GTTTCTTACT 
400
TACAAGCCCA TTTGGCATCA CTAGAGCTAC CTCAACCGCA AACGCGGCCA 
450
CAGCCTATGC CGCAACCGCA ACCGCTCTTT TTCACTCCTC CTCCCCCTCT 
500
TGCCATAACC GATTTACCTG CATCAGTCTC ACCCTTGCCC TCAACCTATG 
550
ACCTAGCATC CATCTTCGAT CAAACGACGT CTTCTTCGGC ATGGGCCACG 
600
CAACAACGAA GATTCATTGA TCCACGTCAC CAATACGGTG TATCATCGTC 
650
TTCCTCTTCT GTCGCCGTGG GGCTCGGTGG TGAAAACAGT CATGACCTCC 
700
AAGCATTAGC ACATGAACTC CTCCATAGAC AAGGATCTCC TCCCCCGGCA 
750
GCTACCGACC ACTCGCCGTC TCGAACTATG TCTAGATGA
800

>AT2G45420.1 longest ORF length:262
MSGGGNTITA VGGGGGGCGG GGSSGGGGSS GGGGGGPCGA CKFLRRKCVP 
50
GCIFAPYFDS EQGSAYFAAV HKVFGASNVS KLLLHIPVHR RSDAVVTICY 
100
EAQARIRDPI YGCVAHIFAL QQQVVNLQAE VSYLQAHLAS LELPQPQTRP 
150
QPMPQPQPLF FTPPPPLAIT DLPASVSPLP STYDLASIFD QTTSSSAWAT 
200
QQRRFIDPRH QYGVSSSSSS VAVGLGGENS HDLQALAHEL LHRQGSPPPA 
250
ATDHSPSRTM SR
300