fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G45430 AHL22 AT-hook motif nuclear-localized protein 22 (.1)

>AT2G45430.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 45
EcoRI G|AATTC 897
EcoRV GAT|ATC 163
HindIII A|AGCTT 920
HpaI GTT|AAC 514
PvuII CAG|CTG 581, 752, 914
XhoI C|TCGAG 326


Click here to view TAIR data

>AT2G45430.1 length:954
ATGGATCAGG TCTCTCGCTC TCTTCCTCCA CCTTTTCTCT CAAGAGATCT 
50
CCATCTTCAC CCACACCATC AATTCCAGCA TCAGCAGCAG CAGCAGCAAC 
100
AGAATCACGG CCACGATATA GACCAGCACC GAATCGGTGG GCTAAAACGT 
150
GACCGAGATG CTGATATCGA TCCCAACGAG CACTCTTCAG CCGGAAAAGA 
200
TCAAAGTACT CCTGGCTCCG GTGGAGAAAG CGGCGGCGGA GGAGGAGGAG 
250
ATAATCACAT CACGAGAAGG CCACGTGGCA GACCAGCGGG ATCTAAGAAC 
300
AAACCAAAAC CGCCAATCAT CATCACTCGA GACAGCGCAA ACGCTCTCAA 
350
ATCTCATGTC ATGGAAGTAG CAAACGGATG TGACGTCATG GAAAGTGTCA 
400
CCGTCTTCGC TCGCCGTCGC CAACGTGGCA TCTGCGTTTT GAGCGGAAAC 
450
GGCGCCGTTA CCAACGTTAC CATAAGACAA CCAGCTTCAG TACCTGGTGG 
500
TGGCTCATCT GTCGTTAACT TACACGGACG TTTCGAGATT CTTTCTCTCT 
550
CGGGATCATT CCTTCCTCCT CCGGCTCCAC CAGCTGCGTC AGGTCTAACG 
600
ATTTACTTAG CCGGTGGTCA GGGACAGGTT GTTGGAGGAA GCGTGGTTGG 
650
TCCACTCATG GCTTCAGGAC CTGTAGTGAT TATGGCAGCT TCGTTTGGAA 
700
ACGCTGCGTA TGAGAGACTG CCGTTGGAGG AAGACGATCA AGAAGAGCAA 
750
ACAGCTGGAG CGGTTGCTAA TAATATCGAT GGAAACGCAA CAATGGGTGG 
800
TGGAACGCAA ACGCAAACTC AGACGCAGCA GCAACAGCAA CAACAGTTGA 
850
TGCAAGATCC GACGTCGTTT ATACAAGGGT TGCCTCCGAA TCTTATGAAT 
900
TCTGTTCAAT TGCCAGCTGA AGCTTATTGG GGAACTCCGA GACCATCTTT 
950
CTAA
1000

>AT2G45430.1 longest ORF length:317
MDQVSRSLPP PFLSRDLHLH PHHQFQHQQQ QQQQNHGHDI DQHRIGGLKR 
50
DRDADIDPNE HSSAGKDQST PGSGGESGGG GGGDNHITRR PRGRPAGSKN 
100
KPKPPIIITR DSANALKSHV MEVANGCDVM ESVTVFARRR QRGICVLSGN 
150
GAVTNVTIRQ PASVPGGGSS VVNLHGRFEI LSLSGSFLPP PAPPAASGLT 
200
IYLAGGQGQV VGGSVVGPLM ASGPVVIMAA SFGNAAYERL PLEEDDQEEQ 
250
TAGAVANNID GNATMGGGTQ TQTQTQQQQQ QQLMQDPTSF IQGLPPNLMN 
300
SVQLPAEAYW GTPRPSF
350