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| Locus | Common name | Short description |
| AT2G45460 | SMAD/FHA domain-containing protein (.1.2.3) |
>AT2G45460.1 CDS map
>>Show genomic map
Uncut enzymes: Acc65I, AccIII(BspMII), AflII, AflIII, AgeI, AhdI, AlwI, ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BlpI, BmrI, BpmI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BssHII, BssSI, BstAPI, BstEII, BstXI, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HindIII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, , NarI, NciI, NdeI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PstI, RsrII, SacI, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XmaI
| Name | Recognition sequence | Cut positions |
| AatII | GACGT|C | 1534, 2247 |
| AccI | GT|[AC][TG]AC | 6, 418, 550, 1833 |
| AccII(FnuDII) | CG|CG | 90, 554 |
| AciI | C|CGC | 222, 553, 775 |
| AclI | AA|CGTT | 205 |
| AfeI | AGC|GCT | 1003 |
| AluI | AG|CT | 163, 900, 958, 1063, 1141, 1168, 1354, 1374, 1462, 1653, 1750, 1808, 1946, 2110, 2173, 2260, 2737 |
| AlwNI | CAGNNN|CTG | 14, 2024, 2609 |
| Aor51HI(Eco47III) | AGC|GCT | 1003 |
| ApoI | Pu|AATTPy | 972, 1791 |
| AvaI | C|PyCGPuG | 1466 |
| AvaII | G|G[AT]CC | 660, 669, 2441 |
| BamHI | G|GATCC | 2661 |
| BclI | T|GATCA | 909, 2085, 2505, 2574 |
| BfaI | C|TAG | 57, 315, 1349, 1502, 1676, 1709, 2258 |
| BglI | GCCNNNN|NGGC | 109, 256 |
| BglII | A|GATCT | 1622 |
| BsaAI | PyAC|GTPu | 905 |
| BsaBI | GATNN|NNATC | 1718, 2573, 2696 |
| BsaHI | GPu|CGPyC | 3, 1534, 2247 |
| BsaJI | C|CNNGG | 140, 740, 1554, 1802, 2437, 2720 |
| BsiEI | CGPuPy|CG | 2202 |
| BsiHKAI | G[AT]GC[AT]|C | 790 |
| BslI | CCNNNNN|NNGG | 374, 1822, 2013 |
| BsoBI | C|PyCGPuG | 1466 |
| Bsp1286I | G[GAT]GC[CAT]|C | 790 |
| BspHI | T|CATGA | 1904, 2577 |
| BsrDI | GCAATGNN| | 238 |
| BsrFI | Pu|CCGGPy | 251, 375 |
| BsrGI | T|GTACA | 2307 |
| BsrI | ACTGGN| | 936, 1404 |
| BssKI | |CCNGG | 62, 740, 1801, 2061, 2436, 2444 |
| BstBI | TT|CGAA | 201 |
| BstF5I | GGATGNN| | 397, 685, 1087, 1870, 2461 |
| BstNI | CC|[AT]GG | 62, 740, 1801, 2061, 2436, 2444 |
| BstUI | CG|CG | 90, 554 |
| BstYI | Pu|GATCPy | 1443, 1622, 2253, 2661 |
| BstZ17I | GTA|TAC | 550 |
| BtgI | C|CPuPyGG | 1554, 2720 |
| Cac8I | GCN|NGC | 58, 241, 251, 510, 1377, 1596, 1807 |
| Cfr10I | [AG]|CCGG[TC] | 251, 375 |
| DdeI | C|TNAG | 155, 178, 293, 720, 1020, 1171, 1330, 1366, 1496, 1588, 1615, 1979, 2091, 2143, 2540, 2603, 2743 |
| DpnI | GA-CH3|TC | 94, 908, 1442, 1621, 1718, 2084, 2201, 2252, 2497, 2504, 2573, 2646, 2660, 2696 |
| DpnII | |GATC | 94, 908, 1442, 1621, 1718, 2084, 2201, 2252, 2497, 2504, 2573, 2646, 2660, 2696 |
| DrdI | GACNNNN|NNGTC | 151, 1534 |
| EcoO109I | PuG|GNCCPy | 2442 |
| EcoRI | G|AATTC | 972 |
| Fnu4HI | GC|NGC | 12, 78, 84, 159, 302, 1143, 1200, 1373, 1461, 1515, 1643, 1797 |
| HaeII | PuGCGC|Py | 112, 1003 |
| HaeIII | GG|CC | 470, 1916 |
| HhaI | GCG|C | 111, 578, 938, 1002 |
| HinP1I | G|CGC | 111, 578, 938, 1002 |
| HincII | GTPy|PuAC | 459, 946 |
| HinfI | G|ANTC | 198, 214, 330, 350, 771, 864, 1251, 1570, 1907, 2297, 2351, 2357, 2391, 2538, 2562, 2607 |
| HpaI | GTT|AAC | 459 |
| HpaII | C|CGG | 250, 374 |
| Hpy188I | TCN|GA | 279, 1194, 1254, 1329, 1365, 1589, 1950, 1980, 2090, 2162, 2250, 2265, 2354, 2402, 2535, 2541, 2559, 2565, 2604, 2610, 2625, 2658, 2699 |
| Hpy99I | CG[AT]CG| | 127, 1535, 2248, 2656 |
| HpyCH4III | ACN|GT | 355, 405, 493, 1342, 1450, 1552 |
| HpyCH4IV | A|CGT | 204, 437, 904, 1533, 1856, 2246 |
| HpyCH4V | TG|CA | 85, 337, 541, 587, 834, 840, 871, 1011, 1272, 1390, 1434, 1558, 1636, 1665, 1870, 1960, 2124, 2464 |
| MboI | |GATC | 94, 908, 1442, 1621, 1718, 2084, 2201, 2252, 2497, 2504, 2573, 2646, 2660, 2696 |
| MfeI | C|AATTG | 447, 782 |
| MseI | T|TAA | 458, 630, 690, 1722, 2186, 2481 |
| MslI | CAPyNN|NNPuTG | 800, 1556, 1895, 2156 |
| MspA1I | C[AC]G|C[GT]G | 11, 959 |
| MspI | C|CGG | 250, 374 |
| MwoI | GCNNNNN|NNGC | 9, 54, 84, 109, 171, 241, 256, 1062, 1635, 1652, 1803 |
| N.BstNBI | GAGTCNNNN|N | 219, 776, 1256, 1912, 2356 |
| NaeI | GCC|GGC | 251 |
| NcoI | C|CATGG | 2720 |
| NgoMIV | G|CCGGC | 251 |
| NheI | G|CTAGC | 58 |
| NlaIII | CATG| | 306, 527, 589, 794, 1476, 1573, 1860, 1889, 1903, 2150, 2309, 2522, 2576, 2681, 2719 |
| NlaIV | GGN|NCC | 661, 2192, 2441, 2661 |
| PaeR7I | C|TCGAG | 1466 |
| PpuMI | PuG|G[AT]CCPy | 2442 |
| PspGI | |CC[AT]GG | 62, 740, 1801, 2061, 2436, 2444 |
| PvuI | CGAT|CG | 2202 |
| PvuII | CAG|CTG | 959 |
| RsaI | GT|AC | 435, 560, 1998, 2147, 2235, 2306, 2384, 2526 |
| Sau3AI | |GATC | 94, 908, 1442, 1621, 1718, 2084, 2201, 2252, 2497, 2504, 2573, 2646, 2660, 2696 |
| Sau96I | G|GNCC | 471, 660, 669, 2441 |
| ScaI | AGT|ACT | 561 |
| ScrFI | CC|NGG | 62, 740, 1801, 2061, 2436, 2444 |
| SfcI | C|TPuPyAG | 8, 1061, 2027, 2240 |
| SmlI | C|TPyPuAG | 1358, 1466, 1657, 2216 |
| StyI | C|C[AT][AT]GG | 140, 2720 |
| Taqƒ¿I | T|CGA | 50, 200, 1278, 1465, 1522, 1536, 2203 |
| TfiI | G|A[AT]TC | 198, 330, 350, 864, 1570, 2297, 2391, 2607 |
| TliI | C|TCGAG | 1466 |
| TseI | G|C[AT]GC | 78, 84, 159, 302, 1143, 1200, 1373, 1461, 1515, 1643, 1797 |
| Tsp45I | |GT[CG]AC | 310, 496, 1696, 2376, 2448 |
| Tsp509I | |AATT | 34, 226, 340, 446, 628, 729, 781, 912, 951, 971, 1039, 1162, 1179, 1296, 1691, 1790 |
| TspRI | NNCA[CG]TGNN| | 356, 658, 871, 1024, 1453, 2493, 2503 |
| XbaI | T|CTAGA | 1677 |
| XcmI | CCANNNNN|NNNNTGG | 2691 |
| XhoI | C|TCGAG | 1466 |
| XmnI | GAANN|NNTTC | 1040, 2159 |
Click here to view TAIR data
>AT2G45460.1 length:2748
ATGGCGTCTA CAGCGGCTGA ACAAGACGAG AGAAAAATTG TATCGGTAGC | 50 |
ATCGAACGCT AGCCAGGACA TCAAAACGGC TGCTGCTGCA TCGCGGATCA | 100 |
GTAGCCAAAA CGGCGCTTCT CCATCTCCGT CGCTCAACTC CAAGGACTTC | 150 |
ATCGTCTCAG CAGCAGCTAA CATCGCTTCT CAGCCGTTAC AGAACTACGA | 200 |
TTCGAACGTT TGGGGAGTCC TCACCGCAAT TTCAAGCAAT GCTCGCAAAC | 250 |
GCCGGCAGGG CATAAATATA CTTTTGACTT CTGATGAGCA TTGCTTAGGA | 300 |
CGGCTGCCAT GTCACGCTAG TTATCAGGTA GAATCAAATG CAATTAGCGG | 350 |
GAATCACTGT AAGGTATTCC GTAAGCCGGT AACAGGCGGT GATGGGGATG | 400 |
ATGTAACTGT CTTTATGGTA GACACAAGCA CAAATGGTAC GTTTCTCAAT | 450 |
TGGGAAAGGT TAACAAAGAA TGGCCCTGAA GTCAGGGTTC AACACGGTGA | 500 |
CATCATATCG CTTGCTGTTC CTCCAGAGCA TGAGAAGGCA TTTGCATTTG | 550 |
TATACCGCGA AGTACTTGGT AATAATCCTG CGCTGTCCTG CATGAACAGA | 600 |
AAAAGAAAAG CAGAGGATAC TACTTGTGAA ATTAAGAGGC AGAAGGGCAT | 650 |
AGGCATCAGT GGTCCCAATG GTCCAATATC TTTGGATGAT TTTAAGAGCC | 700 |
TCCAGCGTTC AAACACAGAA CTGAGGAAGC AATTAGAAGC CCAGGTGCTT | 750 |
ACCATTGACA CTCTGCGTAA TGAGTCCCGC TCAATTGTTG AGCACCATGA | 800 |
AAGTGATTAT TTGAGTATCT CTACTGAAAT ATCTTTGCAT TTGCAGGAAA | 850 |
TAAAACAGAT AAAAGAATCC ACTGCAAAAT CATTTCATAA TGAACTGATT | 900 |
GAGCTACGTG ATCAATTAGA TACGAAGCAG AAGGAACTGG CGCAGGTCAA | 950 |
CAAATTATCA GCTGAACAGA AGAATTCCAT AGATGAACTT GGTGAGAGAG | 1000 |
TAAGCGCTTC TTTGCAAACT CTCAGTGAAG CAAATGAAGT AATTCAAAGT | 1050 |
CAAAAGGCAT CTATAGCTGA ACTGAAGACG GGGTTGGATG AAGAGAGAAA | 1100 |
CCAAAGAAGA GAGGAAAGAG AAACTGCCAT TGCTGAACTC AAAGCTGCGA | 1150 |
TACATAGATG CCAAATTGAA GCTCAGGAAG AATTGAAAAG ATTTTCTGAT | 1200 |
GCTGCTATGA GACACGAGAG GGAACAACAA GAAGTAATCA ACAAAATGAA | 1250 |
GGAGTCAGAG AAAGAAAAGT CAATGCAAGT CGAAACATTG ATGTCAAAAT | 1300 |
TGGAAGATAC AAGGCAGAGG TTGGTGTGTT CTGAGAATAG AAACCGTCTG | 1350 |
CTAGAAGCTC AAGTTTCTGA GGAGCAGCTT GCTTTTGCTG ATGCACAAAA | 1400 |
AAAACTGGAA GAACTTGACC TTCAAGTAAA AAGACTGCAA AAGGATCTGG | 1450 |
ACAGTGAAAA GGCAGCTCGA GAAGAAGCAT GGGCGAAAGT GTCTGCCTTA | 1500 |
GAACTAGAGA TAAGTGCTGC TGTTCGAGAC CTTGACGTCG AAAGACAGAG | 1550 |
ACACCGTGGT GCAAGGGAAA GAATCATGCT CCGTGAAACT CAGATGCGGG | 1600 |
CATTTTATTC TACGACTGAG GAGATCTCGG CTTTGTTTGC AAAGCAGCAG | 1650 |
GAACAGCTCA AGACTATGCA GAGAACTCTA GAAGATGAGG ATAATTGTGA | 1700 |
CAATACTTCA CTAGATATTG ATCTTAATCC AATAAACAGA AGTCCCAACA | 1750 |
GAGCTAATAC GCAGGGAGAT AAAAGAGCAA CTTCCCATTT GAATTTTGCT | 1800 |
GCCAGGGCAA GCTCGTCCAC TTCAGGGCAA AGGTCTACCA GAAATGAAGT | 1850 |
TGTGGATACG TCATGTGAGG ATGCAGATGC TACCCAAAAG CATGATTGTG | 1900 |
AAATCATGAG TCAGGAAGGC CAAAACACCC AAGAAGCAGA GTATCCAAGC | 1950 |
TCTGATAAAG TTGCAAAGGG TGGCTTTGGC TCAGATATAG AAGGTATTGG | 2000 |
TACAGCACCC ACTTCGGGAA CAGACCCTGT AGGAACAGAG CAAGTCAATG | 2050 |
AAACTCAAAG TCCAGGAAAT GATTATGAGA GAAATGATCA TCTGAGGAAG | 2100 |
TCTATTATTT TAGCTGGTGA TACAATGCAA ATAGATTGTG AAACTCAGGT | 2150 |
ACATGAAAGT GTTCAGATTG AAGGAGCTGT TCTCTTGTTA AGGAACCCGA | 2200 |
ACGATCGAAG GGATACTCAA GACATAGAGG GAGTAGGTAC TATAGGGACG | 2250 |
TCGGATCTTC TAGCTTCTGA AGTTGCGGGG AGTTGGGCTA ATAGCACGAA | 2300 |
TCCTTCTGTA CATGGAGAAA ACGAAACTGA AAGAAGTAGA GAAGATGAAG | 2350 |
AGAGTCAGAC TCAAAAAATC AAGGAAGTGA CCATAGTACA GGATTCTGCT | 2400 |
GGTCAGATAG GGGAAAGTCA AACTAAACCG ACAAGTCCAG GGGTCCTGGT | 2450 |
CACTAACAAG GATGATGCAG AGCGTGGAGT TATTAACGAG CCAGTGGGGA | 2500 |
TCACTGATCA AGGGAAGATA AAACATGGTA CTCGTTCGGA CTCAGAGACA | 2550 |
GAGAGTTGTT CTGACTCTGA TGATGATCAT GAGAAGGAAA AACACAATCC | 2600 |
TGTCTCAGAT TCTGATACAG AGGGTTCTGA TATGAATGAT GACAAGGGAT | 2650 |
CACTCTCGTC GGATCCTGAT ACAGAAAGAA GCCATGAAGT TGATGGGGAT | 2700 |
CAGAAGAAAC AAGTGGACAC CATGGACGAA GACGATAAAG CTACTTAG | 2750 |
>AT2G45460.1 longest ORF length:915
MASTAAEQDE RKIVSVASNA SQDIKTAAAA SRISSQNGAS PSPSLNSKDF | 50 |
IVSAAANIAS QPLQNYDSNV WGVLTAISSN ARKRRQGINI LLTSDEHCLG | 100 |
RLPCHASYQV ESNAISGNHC KVFRKPVTGG DGDDVTVFMV DTSTNGTFLN | 150 |
WERLTKNGPE VRVQHGDIIS LAVPPEHEKA FAFVYREVLG NNPALSCMNR | 200 |
KRKAEDTTCE IKRQKGIGIS GPNGPISLDD FKSLQRSNTE LRKQLEAQVL | 250 |
TIDTLRNESR SIVEHHESDY LSISTEISLH LQEIKQIKES TAKSFHNELI | 300 |
ELRDQLDTKQ KELAQVNKLS AEQKNSIDEL GERVSASLQT LSEANEVIQS | 350 |
QKASIAELKT GLDEERNQRR EERETAIAEL KAAIHRCQIE AQEELKRFSD | 400 |
AAMRHEREQQ EVINKMKESE KEKSMQVETL MSKLEDTRQR LVCSENRNRL | 450 |
LEAQVSEEQL AFADAQKKLE ELDLQVKRLQ KDLDSEKAAR EEAWAKVSAL | 500 |
ELEISAAVRD LDVERQRHRG ARERIMLRET QMRAFYSTTE EISALFAKQQ | 550 |
EQLKTMQRTL EDEDNCDNTS LDIDLNPINR SPNRANTQGD KRATSHLNFA | 600 |
ARASSSTSGQ RSTRNEVVDT SCEDADATQK HDCEIMSQEG QNTQEAEYPS | 650 |
SDKVAKGGFG SDIEGIGTAP TSGTDPVGTE QVNETQSPGN DYERNDHLRK | 700 |
SIILAGDTMQ IDCETQVHES VQIEGAVLLL RNPNDRRDTQ DIEGVGTIGT | 750 |
SDLLASEVAG SWANSTNPSV HGENETERSR EDEESQTQKI KEVTIVQDSA | 800 |
GQIGESQTKP TSPGVLVTNK DDAERGVINE PVGITDQGKI KHGTRSDSET | 850 |
ESCSDSDDDH EKEKHNPVSD SDTEGSDMND DKGSLSSDPD TERSHEVDGD | 900 |
QKKQVDTMDE DDKAT | 950 |