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| Locus | Common name | Short description |
| AT2G45460 | SMAD/FHA domain-containing protein (.1.2.3) |
>AT2G45460.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRV, HindIII, KpnI, NdeI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 2661 |
| BglII | A|GATCT | 1622 |
| EcoRI | G|AATTC | 972 |
| HpaI | GTT|AAC | 459 |
| NcoI | C|CATGG | 2720 |
| NheI | G|CTAGC | 58 |
| PvuII | CAG|CTG | 959 |
| StyI | C|C[AT][AT]GG | 140, 2720 |
| XbaI | T|CTAGA | 1677 |
| XhoI | C|TCGAG | 1466 |
Click here to view TAIR data
>AT2G45460.1 length:2748
ATGGCGTCTA CAGCGGCTGA ACAAGACGAG AGAAAAATTG TATCGGTAGC | 50 |
ATCGAACGCT AGCCAGGACA TCAAAACGGC TGCTGCTGCA TCGCGGATCA | 100 |
GTAGCCAAAA CGGCGCTTCT CCATCTCCGT CGCTCAACTC CAAGGACTTC | 150 |
ATCGTCTCAG CAGCAGCTAA CATCGCTTCT CAGCCGTTAC AGAACTACGA | 200 |
TTCGAACGTT TGGGGAGTCC TCACCGCAAT TTCAAGCAAT GCTCGCAAAC | 250 |
GCCGGCAGGG CATAAATATA CTTTTGACTT CTGATGAGCA TTGCTTAGGA | 300 |
CGGCTGCCAT GTCACGCTAG TTATCAGGTA GAATCAAATG CAATTAGCGG | 350 |
GAATCACTGT AAGGTATTCC GTAAGCCGGT AACAGGCGGT GATGGGGATG | 400 |
ATGTAACTGT CTTTATGGTA GACACAAGCA CAAATGGTAC GTTTCTCAAT | 450 |
TGGGAAAGGT TAACAAAGAA TGGCCCTGAA GTCAGGGTTC AACACGGTGA | 500 |
CATCATATCG CTTGCTGTTC CTCCAGAGCA TGAGAAGGCA TTTGCATTTG | 550 |
TATACCGCGA AGTACTTGGT AATAATCCTG CGCTGTCCTG CATGAACAGA | 600 |
AAAAGAAAAG CAGAGGATAC TACTTGTGAA ATTAAGAGGC AGAAGGGCAT | 650 |
AGGCATCAGT GGTCCCAATG GTCCAATATC TTTGGATGAT TTTAAGAGCC | 700 |
TCCAGCGTTC AAACACAGAA CTGAGGAAGC AATTAGAAGC CCAGGTGCTT | 750 |
ACCATTGACA CTCTGCGTAA TGAGTCCCGC TCAATTGTTG AGCACCATGA | 800 |
AAGTGATTAT TTGAGTATCT CTACTGAAAT ATCTTTGCAT TTGCAGGAAA | 850 |
TAAAACAGAT AAAAGAATCC ACTGCAAAAT CATTTCATAA TGAACTGATT | 900 |
GAGCTACGTG ATCAATTAGA TACGAAGCAG AAGGAACTGG CGCAGGTCAA | 950 |
CAAATTATCA GCTGAACAGA AGAATTCCAT AGATGAACTT GGTGAGAGAG | 1000 |
TAAGCGCTTC TTTGCAAACT CTCAGTGAAG CAAATGAAGT AATTCAAAGT | 1050 |
CAAAAGGCAT CTATAGCTGA ACTGAAGACG GGGTTGGATG AAGAGAGAAA | 1100 |
CCAAAGAAGA GAGGAAAGAG AAACTGCCAT TGCTGAACTC AAAGCTGCGA | 1150 |
TACATAGATG CCAAATTGAA GCTCAGGAAG AATTGAAAAG ATTTTCTGAT | 1200 |
GCTGCTATGA GACACGAGAG GGAACAACAA GAAGTAATCA ACAAAATGAA | 1250 |
GGAGTCAGAG AAAGAAAAGT CAATGCAAGT CGAAACATTG ATGTCAAAAT | 1300 |
TGGAAGATAC AAGGCAGAGG TTGGTGTGTT CTGAGAATAG AAACCGTCTG | 1350 |
CTAGAAGCTC AAGTTTCTGA GGAGCAGCTT GCTTTTGCTG ATGCACAAAA | 1400 |
AAAACTGGAA GAACTTGACC TTCAAGTAAA AAGACTGCAA AAGGATCTGG | 1450 |
ACAGTGAAAA GGCAGCTCGA GAAGAAGCAT GGGCGAAAGT GTCTGCCTTA | 1500 |
GAACTAGAGA TAAGTGCTGC TGTTCGAGAC CTTGACGTCG AAAGACAGAG | 1550 |
ACACCGTGGT GCAAGGGAAA GAATCATGCT CCGTGAAACT CAGATGCGGG | 1600 |
CATTTTATTC TACGACTGAG GAGATCTCGG CTTTGTTTGC AAAGCAGCAG | 1650 |
GAACAGCTCA AGACTATGCA GAGAACTCTA GAAGATGAGG ATAATTGTGA | 1700 |
CAATACTTCA CTAGATATTG ATCTTAATCC AATAAACAGA AGTCCCAACA | 1750 |
GAGCTAATAC GCAGGGAGAT AAAAGAGCAA CTTCCCATTT GAATTTTGCT | 1800 |
GCCAGGGCAA GCTCGTCCAC TTCAGGGCAA AGGTCTACCA GAAATGAAGT | 1850 |
TGTGGATACG TCATGTGAGG ATGCAGATGC TACCCAAAAG CATGATTGTG | 1900 |
AAATCATGAG TCAGGAAGGC CAAAACACCC AAGAAGCAGA GTATCCAAGC | 1950 |
TCTGATAAAG TTGCAAAGGG TGGCTTTGGC TCAGATATAG AAGGTATTGG | 2000 |
TACAGCACCC ACTTCGGGAA CAGACCCTGT AGGAACAGAG CAAGTCAATG | 2050 |
AAACTCAAAG TCCAGGAAAT GATTATGAGA GAAATGATCA TCTGAGGAAG | 2100 |
TCTATTATTT TAGCTGGTGA TACAATGCAA ATAGATTGTG AAACTCAGGT | 2150 |
ACATGAAAGT GTTCAGATTG AAGGAGCTGT TCTCTTGTTA AGGAACCCGA | 2200 |
ACGATCGAAG GGATACTCAA GACATAGAGG GAGTAGGTAC TATAGGGACG | 2250 |
TCGGATCTTC TAGCTTCTGA AGTTGCGGGG AGTTGGGCTA ATAGCACGAA | 2300 |
TCCTTCTGTA CATGGAGAAA ACGAAACTGA AAGAAGTAGA GAAGATGAAG | 2350 |
AGAGTCAGAC TCAAAAAATC AAGGAAGTGA CCATAGTACA GGATTCTGCT | 2400 |
GGTCAGATAG GGGAAAGTCA AACTAAACCG ACAAGTCCAG GGGTCCTGGT | 2450 |
CACTAACAAG GATGATGCAG AGCGTGGAGT TATTAACGAG CCAGTGGGGA | 2500 |
TCACTGATCA AGGGAAGATA AAACATGGTA CTCGTTCGGA CTCAGAGACA | 2550 |
GAGAGTTGTT CTGACTCTGA TGATGATCAT GAGAAGGAAA AACACAATCC | 2600 |
TGTCTCAGAT TCTGATACAG AGGGTTCTGA TATGAATGAT GACAAGGGAT | 2650 |
CACTCTCGTC GGATCCTGAT ACAGAAAGAA GCCATGAAGT TGATGGGGAT | 2700 |
CAGAAGAAAC AAGTGGACAC CATGGACGAA GACGATAAAG CTACTTAG | 2750 |
>AT2G45460.1 longest ORF length:915
MASTAAEQDE RKIVSVASNA SQDIKTAAAA SRISSQNGAS PSPSLNSKDF | 50 |
IVSAAANIAS QPLQNYDSNV WGVLTAISSN ARKRRQGINI LLTSDEHCLG | 100 |
RLPCHASYQV ESNAISGNHC KVFRKPVTGG DGDDVTVFMV DTSTNGTFLN | 150 |
WERLTKNGPE VRVQHGDIIS LAVPPEHEKA FAFVYREVLG NNPALSCMNR | 200 |
KRKAEDTTCE IKRQKGIGIS GPNGPISLDD FKSLQRSNTE LRKQLEAQVL | 250 |
TIDTLRNESR SIVEHHESDY LSISTEISLH LQEIKQIKES TAKSFHNELI | 300 |
ELRDQLDTKQ KELAQVNKLS AEQKNSIDEL GERVSASLQT LSEANEVIQS | 350 |
QKASIAELKT GLDEERNQRR EERETAIAEL KAAIHRCQIE AQEELKRFSD | 400 |
AAMRHEREQQ EVINKMKESE KEKSMQVETL MSKLEDTRQR LVCSENRNRL | 450 |
LEAQVSEEQL AFADAQKKLE ELDLQVKRLQ KDLDSEKAAR EEAWAKVSAL | 500 |
ELEISAAVRD LDVERQRHRG ARERIMLRET QMRAFYSTTE EISALFAKQQ | 550 |
EQLKTMQRTL EDEDNCDNTS LDIDLNPINR SPNRANTQGD KRATSHLNFA | 600 |
ARASSSTSGQ RSTRNEVVDT SCEDADATQK HDCEIMSQEG QNTQEAEYPS | 650 |
SDKVAKGGFG SDIEGIGTAP TSGTDPVGTE QVNETQSPGN DYERNDHLRK | 700 |
SIILAGDTMQ IDCETQVHES VQIEGAVLLL RNPNDRRDTQ DIEGVGTIGT | 750 |
SDLLASEVAG SWANSTNPSV HGENETERSR EDEESQTQKI KEVTIVQDSA | 800 |
GQIGESQTKP TSPGVLVTNK DDAERGVINE PVGITDQGKI KHGTRSDSET | 850 |
ESCSDSDDDH EKEKHNPVSD SDTEGSDMND DKGSLSSDPD TERSHEVDGD | 900 |
QKKQVDTMDE DDKAT | 950 |