fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G45480 ATGRF9 growth-regulating factor 9 (.1)

>AT2G45480.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 580
HindIII A|AGCTT 101, 379
HpaI GTT|AAC 1077
PvuII CAG|CTG 1091


Click here to view TAIR data

>AT2G45480.1 length:1290
ATGCAGAGCC CTAAAATGGA GCAGGAGGAG GTTGAGGAGG AGAGGATGAG 
50
GAATAAGTGG CCGTGGATGA AGGCGGCGCA GTTAATGGAG TTTCGGATGC 
100
AAGCTTTGGT GTATAGATAC ATAGAGGCTG GTCTCCGTGT GCCTCATCAT 
150
CTCGTGGTGC CTATTTGGAA CAGTCTTGCT CTCTCTTCTT CCTCCAATTA 
200
CAACTATCAC TCTTCTTCTC TGTTGAGTAA CAAGGGAGTA ACCCATATCG 
250
ACACGTTGGA AACTGAACCA ACTAGGTGCA GGAGAACAGA TGGGAAGAAA 
300
TGGCGCTGTA GCAACACGGT CCTTCTATTC GAGAAGTACT GTGAACGGCA 
350
CATGCATAGA GGTCGTAAAC GTTCAAGAAA GCTTGTGGAA TCTTCTTCTG 
400
AGGTTGCTTC ATCATCAACC AAATACGACA ACACTTATGG TTTGGATAGG 
450
TATAACGAGA GTCAGAGTCA TCTTCATGGG ACAATCTCGG GTTCTAGTAA 
500
TGCGCAGGTA GTTACCATTG CTTCACTGCC TAGTGCCAGA TCCTGTGAAA 
550
ATGTCATTCG TCCGTCTTTA GTGATCTCTG AATTCACAAA CAAAAGTGTG 
600
AGTCACGGCA GAAAGAACAT GGAGATGAGT TATGATGACT TTATTAATGA 
650
AAAAGAGGCG AGTATGTGTG TTGGAGTTGT TCCTCTTCAA GGTGATGAGA 
700
GCAAACCTTC GGTTCAAAAG TTCTTCCCTG AGGTATCTGA TAAATGCTTA 
750
GAAGCTGCAA AATTCTCAAG CAACAGGAAG AATGATATAA TTGCAAGAAG 
800
CAGAGAATGG AAGAATATGA ATGTTAATGG TGGTTTGTTT CATGGTATCC 
850
ACTTTTCTCC AGACACTGTT CTTCAAGAAC GTGGTTGTTT TCGTTTACAA 
900
GGAGTTGAAA CAGACAATGA ACCAGGAAGG TGCCGAAGAA CAGATGGGAA 
950
GAAGTGGAGA TGCAGCAAAG ATGTTTTGTC TGGTCAGAAG TACTGCGATA 
1000
AGCACATGCA TAGAGGTATG AAGAAGAAGC ATCCAGTTGA TACTACTAAC 
1050
TCACATGAGA ATGCCGGGTT TAGCCCGTTA ACCGTGGAAA CAGCTGTTAG 
1100
ATCGGTTGTG CCTTGCAAAG ATGGAGATGA CCAGAAGCAT TCTGTTTCAG 
1150
TCATGGGAAT TACACTGCCC CGAGTTTCTG ATGAGAAGAG CACTAGCAGT 
1200
TGCAGTACCG ACACTACCAT TACTGACACA GCTTTAAGGG GTGAAGACGA 
1250
CGATGAGGAG TACTTGTCTT TGTTTTCACC AGGTGTTTAG 
1300

>AT2G45480.1 longest ORF length:429
MQSPKMEQEE VEEERMRNKW PWMKAAQLME FRMQALVYRY IEAGLRVPHH 
50
LVVPIWNSLA LSSSSNYNYH SSSLLSNKGV THIDTLETEP TRCRRTDGKK 
100
WRCSNTVLLF EKYCERHMHR GRKRSRKLVE SSSEVASSST KYDNTYGLDR 
150
YNESQSHLHG TISGSSNAQV VTIASLPSAR SCENVIRPSL VISEFTNKSV 
200
SHGRKNMEMS YDDFINEKEA SMCVGVVPLQ GDESKPSVQK FFPEVSDKCL 
250
EAAKFSSNRK NDIIARSREW KNMNVNGGLF HGIHFSPDTV LQERGCFRLQ 
300
GVETDNEPGR CRRTDGKKWR CSKDVLSGQK YCDKHMHRGM KKKHPVDTTN 
350
SHENAGFSPL TVETAVRSVV PCKDGDDQKH SVSVMGITLP RVSDEKSTSS 
400
CSTDTTITDT ALRGEDDDEE YLSLFSPGV
450