Locus |
Common name |
Short description |
AT2G45650 |
AGL6 |
AGAMOUS-like 6 (.1) |
>AT2G45650.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, ApaI, ApaLI, AscI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstXI, BstZ17I, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HincII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TspRI, Tth111I, XbaI, XcmI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
403 |
AciI
| C|CGC |
393, 402 |
AfeI
| AGC|GCT |
372 |
AluI
| AG|CT |
91, 99, 156, 282, 384 |
Aor51HI(Eco47III)
| AGC|GCT |
372 |
ApoI
| Pu|AATTPy |
324, 595 |
AseI
| AT|TAAT |
43 |
AvaI
| C|PyCGPuG |
376 |
BamHI
| G|GATCC |
579 |
BfaI
| C|TAG |
473 |
BglII
| A|GATCT |
339 |
BsaAI
| PyAC|GTPu |
679 |
BsaJI
| C|CNNGG |
150, 575, 741 |
BsaWI
| [AT]|CCGG[AT] |
600 |
BslI
| CCNNNNN|NNGG |
746 |
BsoBI
| C|PyCGPuG |
376 |
BssKI
| |CCNGG |
574 |
BstUI
| CG|CG |
403 |
BstYI
| Pu|GATCPy |
339, 579 |
Bsu36I
| CC|TNAGG |
454 |
BtgI
| C|CPuPyGG |
150 |
Cac8I
| GCN|NGC |
155, 369 |
DdeI
| C|TNAG |
228, 453 |
DpnI
| GA-CH3|TC |
338, 578 |
DpnII
| |GATC |
338, 578 |
EaeI
| Py|GGCCPu |
572 |
Fnu4HI
| GC|NGC |
383, 393, 561 |
HaeII
| PuGCGC|Py |
372 |
HaeIII
| GG|CC |
518, 571 |
HhaI
| GCG|C |
371, 415 |
HinP1I
| G|CGC |
371, 415 |
HindIII
| A|AGCTT |
92, 283 |
HinfI
| G|ANTC |
300, 407 |
HpaII
| C|CGG |
573, 599 |
Hpy188I
| TCN|GA |
591 |
HpyCH4III
| ACN|GT |
76, 200 |
HpyCH4IV
| A|CGT |
678, 714 |
HpyCH4V
| TG|CA |
366, 632, 681 |
MboI
| |GATC |
338, 578 |
MseI
| T|TAA |
42, 285, 501 |
MslI
| CAPyNN|NNPuTG |
620 |
MspI
| C|CGG |
573, 599 |
MwoI
| GCNNNNN|NNGC |
126, 229, 380, 402, 558, 570 |
NciI
| CC|[CG]GG |
574 |
NlaIII
| CATG| |
521 |
NlaIV
| GGN|NCC |
579 |
PaeR7I
| C|TCGAG |
376 |
RsaI
| GT|AC |
312 |
Sau3AI
| |GATC |
338, 578 |
ScrFI
| CC|NGG |
574 |
SmlI
| C|TPyPuAG |
144, 376, 496 |
StyI
| C|C[AT][AT]GG |
741 |
Taqƒ¿I
| T|CGA |
195, 375, 387, 409 |
TfiI
| G|A[AT]TC |
300 |
TliI
| C|TCGAG |
376 |
TseI
| G|C[AT]GC |
383 |
Tsp45I
| |GT[CG]AC |
54, 276 |
Tsp509I
| |AATT |
181, 323, 587, 594, 731 |
XhoI
| C|TCGAG |
376 |
Click here to view TAIR data
>AT2G45650.1 length:759
ATGGGAAGAG GGAGAGTGGA GATGAAGAGG ATAGAGAACA AGATTAATAG | 50 |
ACAAGTGACC TTCTCAAAAA GAAGAAACGG TTTGCTGAAG AAAGCTTATG | 100 |
AGCTTTCTGT TCTTTGCGAT GCCGAAGTTG CTCTCATCAT CTTCTCAAGC | 150 |
CGTGGCAAGC TCTACGAGTT TGGTAGTGTT GGAATTGAAA GCACAATCGA | 200 |
ACGGTATAAT CGTTGTTACA ACTGCTCTCT AAGCAATAAT AAGCCTGAAG | 250 |
AGACTACACA GAGTTGGTGT CAGGAGGTGA CAAAGCTTAA ATCCAAATAC | 300 |
GAATCTCTTG TTCGTACTAA CAGGAATTTG CTTGGAGAAG ATCTTGGAGA | 350 |
AATGGGTGTG AAGGAACTGC AAGCGCTCGA GAGGCAGCTC GAAGCCGCTC | 400 |
TTACCGCGAC TCGACAGCGC AAGACACAAG TTATGATGGA AGAAATGGAA | 450 |
GACCTTAGGA AAAAGGAGAG GCAACTAGGA GACATAAACA AACAACTCAA | 500 |
GATTAAGTTT GAAACGGAAG GCCATGCTTT CAAAACCTTT CAAGACTTAT | 550 |
GGGCAAACTC GGCGGCATCG GTGGCCGGGG ATCCAAACAA TTCTGAATTT | 600 |
CCGGTAGAGC CTTCTCATCC TAATGTATTG GATTGCAACA CCGAACCCTT | 650 |
TTTACAAATA GGGTTTCAAC AACATTACTA CGTGCAAGGT GAAGGGTCTT | 700 |
CGGTATCAAA GAGTAACGTG GCAGGTGAGA CTAATTTCGT CCAAGGTTGG | 750 |
GTTCTTTGA | 800 |
>AT2G45650.1 longest ORF length:252
MGRGRVEMKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS | 50 |
RGKLYEFGSV GIESTIERYN RCYNCSLSNN KPEETTQSWC QEVTKLKSKY | 100 |
ESLVRTNRNL LGEDLGEMGV KELQALERQL EAALTATRQR KTQVMMEEME | 150 |
DLRKKERQLG DINKQLKIKF ETEGHAFKTF QDLWANSAAS VAGDPNNSEF | 200 |
PVEPSHPNVL DCNTEPFLQI GFQQHYYVQG EGSSVSKSNV AGETNFVQGW | 250 |
VL | 300 |
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