fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G45650 AGL6 AGAMOUS-like 6 (.1)

>AT2G45650.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 579
BglII A|GATCT 339
HindIII A|AGCTT 92, 283
StyI C|C[AT][AT]GG 741
XhoI C|TCGAG 376


Click here to view TAIR data

>AT2G45650.1 length:759
ATGGGAAGAG GGAGAGTGGA GATGAAGAGG ATAGAGAACA AGATTAATAG 
50
ACAAGTGACC TTCTCAAAAA GAAGAAACGG TTTGCTGAAG AAAGCTTATG 
100
AGCTTTCTGT TCTTTGCGAT GCCGAAGTTG CTCTCATCAT CTTCTCAAGC 
150
CGTGGCAAGC TCTACGAGTT TGGTAGTGTT GGAATTGAAA GCACAATCGA 
200
ACGGTATAAT CGTTGTTACA ACTGCTCTCT AAGCAATAAT AAGCCTGAAG 
250
AGACTACACA GAGTTGGTGT CAGGAGGTGA CAAAGCTTAA ATCCAAATAC 
300
GAATCTCTTG TTCGTACTAA CAGGAATTTG CTTGGAGAAG ATCTTGGAGA 
350
AATGGGTGTG AAGGAACTGC AAGCGCTCGA GAGGCAGCTC GAAGCCGCTC 
400
TTACCGCGAC TCGACAGCGC AAGACACAAG TTATGATGGA AGAAATGGAA 
450
GACCTTAGGA AAAAGGAGAG GCAACTAGGA GACATAAACA AACAACTCAA 
500
GATTAAGTTT GAAACGGAAG GCCATGCTTT CAAAACCTTT CAAGACTTAT 
550
GGGCAAACTC GGCGGCATCG GTGGCCGGGG ATCCAAACAA TTCTGAATTT 
600
CCGGTAGAGC CTTCTCATCC TAATGTATTG GATTGCAACA CCGAACCCTT 
650
TTTACAAATA GGGTTTCAAC AACATTACTA CGTGCAAGGT GAAGGGTCTT 
700
CGGTATCAAA GAGTAACGTG GCAGGTGAGA CTAATTTCGT CCAAGGTTGG 
750
GTTCTTTGA
800

>AT2G45650.1 longest ORF length:252
MGRGRVEMKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS 
50
RGKLYEFGSV GIESTIERYN RCYNCSLSNN KPEETTQSWC QEVTKLKSKY 
100
ESLVRTNRNL LGEDLGEMGV KELQALERQL EAALTATRQR KTQVMMEEME 
150
DLRKKERQLG DINKQLKIKF ETEGHAFKTF QDLWANSAAS VAGDPNNSEF 
200
PVEPSHPNVL DCNTEPFLQI GFQQHYYVQG EGSSVSKSNV AGETNFVQGW 
250
VL
300