Locus |
Common name |
Short description |
AT2G45650 |
AGL6 |
AGAMOUS-like 6 (.1) |
>AT2G45650.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
579 |
BglII
| A|GATCT |
339 |
HindIII
| A|AGCTT |
92, 283 |
StyI
| C|C[AT][AT]GG |
741 |
XhoI
| C|TCGAG |
376 |
Click here to view TAIR data
>AT2G45650.1 length:759
ATGGGAAGAG GGAGAGTGGA GATGAAGAGG ATAGAGAACA AGATTAATAG | 50 |
ACAAGTGACC TTCTCAAAAA GAAGAAACGG TTTGCTGAAG AAAGCTTATG | 100 |
AGCTTTCTGT TCTTTGCGAT GCCGAAGTTG CTCTCATCAT CTTCTCAAGC | 150 |
CGTGGCAAGC TCTACGAGTT TGGTAGTGTT GGAATTGAAA GCACAATCGA | 200 |
ACGGTATAAT CGTTGTTACA ACTGCTCTCT AAGCAATAAT AAGCCTGAAG | 250 |
AGACTACACA GAGTTGGTGT CAGGAGGTGA CAAAGCTTAA ATCCAAATAC | 300 |
GAATCTCTTG TTCGTACTAA CAGGAATTTG CTTGGAGAAG ATCTTGGAGA | 350 |
AATGGGTGTG AAGGAACTGC AAGCGCTCGA GAGGCAGCTC GAAGCCGCTC | 400 |
TTACCGCGAC TCGACAGCGC AAGACACAAG TTATGATGGA AGAAATGGAA | 450 |
GACCTTAGGA AAAAGGAGAG GCAACTAGGA GACATAAACA AACAACTCAA | 500 |
GATTAAGTTT GAAACGGAAG GCCATGCTTT CAAAACCTTT CAAGACTTAT | 550 |
GGGCAAACTC GGCGGCATCG GTGGCCGGGG ATCCAAACAA TTCTGAATTT | 600 |
CCGGTAGAGC CTTCTCATCC TAATGTATTG GATTGCAACA CCGAACCCTT | 650 |
TTTACAAATA GGGTTTCAAC AACATTACTA CGTGCAAGGT GAAGGGTCTT | 700 |
CGGTATCAAA GAGTAACGTG GCAGGTGAGA CTAATTTCGT CCAAGGTTGG | 750 |
GTTCTTTGA | 800 |
>AT2G45650.1 longest ORF length:252
MGRGRVEMKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS | 50 |
RGKLYEFGSV GIESTIERYN RCYNCSLSNN KPEETTQSWC QEVTKLKSKY | 100 |
ESLVRTNRNL LGEDLGEMGV KELQALERQL EAALTATRQR KTQVMMEEME | 150 |
DLRKKERQLG DINKQLKIKF ETEGHAFKTF QDLWANSAAS VAGDPNNSEF | 200 |
PVEPSHPNVL DCNTEPFLQI GFQQHYYVQG EGSSVSKSNV AGETNFVQGW | 250 |
VL | 300 |
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