fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G45680 TCP9 TCP family transcription factor (.1)

>AT2G45680.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
HindIII A|AGCTT 16
HpaI GTT|AAC 424
SacI GAGCT|C 921
StyI C|C[AT][AT]GG 140
XhoI C|TCGAG 133, 308


Click here to view TAIR data

>AT2G45680.1 length:1071
ATGGCGACAA TTCAGAAGCT TGAAGAAGTT GCAGGCAAAG ATCAAACTCT 
50
AAGAGCCGTT GATCTAACCA TCATCAACGG CGTCAGAAAC GTCGAAACTT 
100
CAAGACCTTT CCAAGTAAAT CCCACAGTGA GTCTCGAGCC CAAGGCGGAG 
150
CCGGTGATGC CGTCGTTTTC AATGTCTTTA GCTCCACCGT CTTCGACAGG 
200
ACCACCATTG AAGAGAGCTT CGACTAAAGA CCGTCACACG AAGGTTGAAG 
250
GAAGAGGGAG AAGGATACGG ATGCCTGCCA CGTGTGCGGC TAGGATTTTT 
300
CAATTAACTC GAGAGTTAGG TCACAAATCC GACGGCGAAA CGATTCGGTG 
350
GTTGTTGGAG AACGCTGAGC CGGCGATTAT AGCCGCCACG GGTACGGGAA 
400
CGGTTCCCGC CATCGCCATG TCGGTTAACG GAACCTTAAA AATCCCGACG 
450
ACGACGAACG CTGATTCTGA TATGGGTGAA AATCTGATGA AGAAGAAACG 
500
TAAACGACCT TCTAACAGTG AGTATATAGA CATAAGCGAC GCCGTTTCAG 
550
CTTCCTCCGG TTTAGCTCCA ATTGCCACGA CGACAACGAT CCAACCTCCG 
600
CAAGCTCTGG CATCATCCAC TGTGGCTCAG CAACTTCTGC CGCAAGGAAT 
650
GTATCCGATG TGGGCTATTC CATCAAACGC AATGATTCCG ACGGTCGGAG 
700
CTTTCTTCTT GATTCCACAA ATCGCTGGTC CGTCGAATCA GCCTCAGTTA 
750
TTAGCTTTTC CCGCCGCCGC TGCTTCGCCG TCGTCTTACG TCGCCGCTGT 
800
TCAACAGGCT TCCACGATGG CTAGACCACC TCCTTTACAA GTTGTTCCAA 
850
GCAGCGGCTT TGTATCCGTT TCAGACGTTA GCGGTTCGAA TTTATCAAGA 
900
GCGACGTCGG TTATGGCTCC GAGCTCAAGC TCAGGCGTAA CAACCGGTAG 
950
TTCATCGTCA ATTGCAACAA CAACGACGCA CACGCTGAGA GACTTCTCCC 
1000
TAGAGATATA CGAGAAACAA GAGCTTCACC AGTTCATGAG CACCACAACA 
1050
GCACGGTCAT CGAACCACTG A
1100

>AT2G45680.1 longest ORF length:356
MATIQKLEEV AGKDQTLRAV DLTIINGVRN VETSRPFQVN PTVSLEPKAE 
50
PVMPSFSMSL APPSSTGPPL KRASTKDRHT KVEGRGRRIR MPATCAARIF 
100
QLTRELGHKS DGETIRWLLE NAEPAIIAAT GTGTVPAIAM SVNGTLKIPT 
150
TTNADSDMGE NLMKKKRKRP SNSEYIDISD AVSASSGLAP IATTTTIQPP 
200
QALASSTVAQ QLLPQGMYPM WAIPSNAMIP TVGAFFLIPQ IAGPSNQPQL 
250
LAFPAAAASP SSYVAAVQQA STMARPPPLQ VVPSSGFVSV SDVSGSNLSR 
300
ATSVMAPSSS SGVTTGSSSS IATTTTHTLR DFSLEIYEKQ ELHQFMSTTT 
350
ARSSNH
400