|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT2G45850 | AT hook motif DNA-binding family protein (.1.2) |
>AT2G45850.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| HindIII | A|AGCTT | 705, 875 |
| NheI | G|CTAGC | 745 |
| SacI | GAGCT|C | 224 |
| SalI | G|TCGAC | 407 |
Click here to view TAIR data
>AT2G45850.1 length:1047
ATGGATCGAA GAGATGCAAT GGGATTATCC GGGTCAGGTT CTTACTATAT | 50 |
CCATAGAGGA TTATCCGGGT CGGGTCCTCC AACGTTTCAT GGATCACCAC | 100 |
AGCAACAGCA AGGTCTTCGT CACTTACCTA ATCAAAACTC TCCATTCGGG | 150 |
TCAGGCTCCA CTGGTTTCGG ATCTCCTTCT TTACACGGTG ATCCTTCTCT | 200 |
GGCAACAGCA GCCGGAGGAG CCGGAGCTCT TCCTCATCAT ATCGGCGTTA | 250 |
ATATGATTGC TCCTCCTCCA CCTCCCAGTG AAACTCCGAT GAAACGAAAG | 300 |
AGAGGACGGC CTAGAAAATA CGGTCAAGAC GGCTCTGTTT CTTTGGCTCT | 350 |
GTCGTCTTCC TCTGTTTCGA CCATTACTCC CAACAACTCT AACAAACGCG | 400 |
GCCGTGGTCG ACCTCCGGGC TCCGGCAAGA AACAGAGAAT GGCTTCCGTT | 450 |
GGTGAACTGA TGCCTTCATC TTCTGGAATG AGCTTCACGC CACATGTTAT | 500 |
CGCGGTTTCA ATAGGAGAAG ATATTGCATC AAAGGTTATA GCTTTCTCTC | 550 |
AACAAGGTCC GAGAGCCATT TGCGTTTTAT CTGCAAGTGG TGCAGTCTCT | 600 |
ACTGCAACAC TTATTCAACC ATCAGCATCT CCCGGAGCCA TTAAATACGA | 650 |
GGGCCGGTTT GAAATCCTAG CGTTATCAAC ATCTTATATA GTGGCAACTG | 700 |
ATGGAAGCTT CCGTAACCGA ACTGGAAACT TATCGGTTTC GCTTGCTAGC | 750 |
CCCGATGGGC GTGTGATTGG CGGTGCCATT GGTGGGCCTT TAATAGCTGC | 800 |
AAGTCCTGTT CAGGTTATTG TAGGGAGCTT TATATGGGCA GCTCCAAAGA | 850 |
TCAAGAGCAA GAAACGAGAA GAAGAAGCTT CTGAAGTTGT TCAAGAAACT | 900 |
GATGATCACC ACGTTCTGGA CAATAATAAC AACACGATTT CGCCTGTCCC | 950 |
TCAGCAGCAG CCAAACCAAA ACCTGATTTG GTCAACAGGT TCAAGGCAAA | 1000 |
TGGATATGCG TCATGCTCAT GCTGATATTG ATTTAATGCG CGGTTGA | 1050 |
>AT2G45850.1 longest ORF length:348
MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG | 50 |
SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK | 100 |
RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV | 150 |
GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS | 200 |
TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS | 250 |
PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET | 300 |
DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG | 350 |