fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G45880 BAM7, BMY4 BETA-AMYLASE 4, beta-amylase 7 (.1)

>AT2G45880.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 1304
KpnI GGTAC|C 1271
SpeI A|CTAGT 31, 1557
XbaI T|CTAGA 1212
XhoI C|TCGAG 691, 1397, 1847


Click here to view TAIR data

>AT2G45880.1 length:2076
ATGGCGACGG ATATGCATAA ACTGCTTGGA ACTAGTGAAG AGGATGATGA 
50
CGAAGAAATG GACATGGATG TGAAGGAAGA AGATGATGGA GACCGACGAA 
100
ATAGAGACAA ACACGCAGCT TCAGGCAGTA GTAGTAATGA CGAGTTTATG 
150
TTTCAGCAGT CAATGCAAGA TCAAGTGGGC ACTCCTGGGG GAGGAGGAAG 
200
TCGCAGAAGT AGACCGCTTG AAGAGAAGGA GCGAACTAAG TTGAGAGAGC 
250
GCCATCGAAG GGCTATAACT GCAAGGATAC TAGGCGGGTT ACGAAGGCAT 
300
GGGAATTATA ACCTGAGAGT TAGAGCTGAT ATTAACGATG TTATCGCGGC 
350
TTTGGCAAGG GAAGCTGGAT GGGTTGTTCT TCCTGATGGA ACTACTTTTC 
400
CATCCAAATC TCAGGGGACA AAGCCTACTG GTGGTTCTTC TGCGGTTGCG 
450
GCAGGTTCAT CAGCTTCTCA CATTGCATCA CAGCAAACCT CACCTCCTGC 
500
TCTTAGAGTG GTATCATCTG GGCTTAGAAG CCCAGTGGAA CTCAGCTCTT 
550
GCCGTATGAA AGGTGTTTTC ACACCCGCTC CATCACCGTA TGATATGCTC 
600
CCAATCCAAT CTCCAGAACT GGTTGGCAGT GTAAATAAGG CTGAGGGGCT 
650
TGTTGGTTGT TCAGTCGATG TTATCAACTC TAAACAAATT CTCGAGATTC 
700
CTCCAAATCT GACGGAGCAA GATTTCTCTG GCACTCCTTA TGTTCCGGTT 
750
TATGTGATGT TACCACTTGG GGTTATCAAT ATGAAGTGTG AATTGGCTGA 
800
TCGAGATGGA CTGCTAAAGC ACTTACGAAT ATTGAAATCA ATCCATGTTG 
850
ATGGGGTTAA AGTGGATTGT TGGTGGGGAA TAGTTGAGGG TCATTCCCCC 
900
CAGGAGTATA ATTGGACTGG TTACAGGCAG CTTTTTCAGA TGGTCCGCGA 
950
TCTTAATCTT AAGATACAGG TTCTAATGTC CTTTCATGAA TGTGGAGGCA 
1000
ATGTTGGTGA TGATGTTTGC ATCCCACTTC CTCATTGGGT GGCAGAAATA 
1050
GGACGAACCA ATCCGGACAT ATATTTCACT GATAGAGAGG GAAGACGAAA 
1100
CCCAGAATGC CTTTCTTGGG GTATTGACAA GGAACGTATT TTAAGAGGCA 
1150
GAACTGCACT TGAGGTGTAC TTTGATTACA TGAGAAGTTT TCGGATAGAA 
1200
CTTGCAGAGT TTCTAGAGGA TGGTGTAATA TCTATGGTTG AAATTGGACT 
1250
AGGCCCCTGT GGAGAGTTAC GGTACCCTTC TTGTCCCATA AAACACGGGT 
1300
GGCGATATCC AGGTGTTGGA GAGTTTCAGT GTTATGACAA GTATCTCTCG 
1350
AAGAGCCTGA GAAAGGCAGC AGAATCAAGG GGGCACCTGT TTTGGGCTCG 
1400
AGGCCCAGAT AACACCGGCT CCTACAATTC TCAGCCGCAG GGAACCGGTT 
1450
TCTTCTGTGA TGGAGGTGAC TACGATGGCC TCTATGGAAG ATTCTTTCTC 
1500
AAATGGTACT CACAGGTTTT GATAGACCAT GCTGACCAAA TCCTCTGTCT 
1550
CGCTAAACTA GTCTTCGACA GTAGCTGCAT TGCAGCAAAG CTCCCAGACG 
1600
TCCACTGGTG GTACAGAACA GCAAGCCATG CCGCTGAGCT AACCGCTGGA 
1650
TTCTACAACC CGAGCAACCG AGATGGTTAT TCTGCAATTG CATCTACACT 
1700
TAAGAAGCAT GGTGCCACTC TGAGTTTTGT ATCCGGAGAA GTGCAAGTTC 
1750
TAAACCGTCC AGATGATTTC TCAGGAGCAT TAGGAGAACC TGAGGCAGTA 
1800
GCTTGGCAGG TATTAAACGC TGCTTGGGAC AGCGGTACAC CGGTTGCTCG 
1850
AGAGAACTCG CTTGCTTGCC ATGATAGAGT TGGTTATAAC AAAATGTTAG 
1900
AAAGCGTTAA GTTTCGGAAC GATCCAGATA GAAAACATTT GTCATCATTT 
1950
GCCTATAGTA GACTCGTCCC AGCTCTCATG GAAGGACATA ACATTGTCGA 
2000
ATTTGAGCGG TTTGTCAAGA AGTTGCATGG GGAAGCTGTA ATGAATCATC 
2050
ATCATCATCA TCATCAACAG GTTTAG
2100

>AT2G45880.1 longest ORF length:691
MATDMHKLLG TSEEDDDEEM DMDVKEEDDG DRRNRDKHAA SGSSSNDEFM 
50
FQQSMQDQVG TPGGGGSRRS RPLEEKERTK LRERHRRAIT ARILGGLRRH 
100
GNYNLRVRAD INDVIAALAR EAGWVVLPDG TTFPSKSQGT KPTGGSSAVA 
150
AGSSASHIAS QQTSPPALRV VSSGLRSPVE LSSCRMKGVF TPAPSPYDML 
200
PIQSPELVGS VNKAEGLVGC SVDVINSKQI LEIPPNLTEQ DFSGTPYVPV 
250
YVMLPLGVIN MKCELADRDG LLKHLRILKS IHVDGVKVDC WWGIVEGHSP 
300
QEYNWTGYRQ LFQMVRDLNL KIQVLMSFHE CGGNVGDDVC IPLPHWVAEI 
350
GRTNPDIYFT DREGRRNPEC LSWGIDKERI LRGRTALEVY FDYMRSFRIE 
400
LAEFLEDGVI SMVEIGLGPC GELRYPSCPI KHGWRYPGVG EFQCYDKYLS 
450
KSLRKAAESR GHLFWARGPD NTGSYNSQPQ GTGFFCDGGD YDGLYGRFFL 
500
KWYSQVLIDH ADQILCLAKL VFDSSCIAAK LPDVHWWYRT ASHAAELTAG 
550
FYNPSNRDGY SAIASTLKKH GATLSFVSGE VQVLNRPDDF SGALGEPEAV 
600
AWQVLNAAWD SGTPVARENS LACHDRVGYN KMLESVKFRN DPDRKHLSSF 
650
AYSRLVPALM EGHNIVEFER FVKKLHGEAV MNHHHHHHQQ V
700