|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT2G46040 | ARID/BRIGHT DNA-binding domain;ELM2 domain protein (.1) |
>AT2G46040.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 786 |
| HpaI | GTT|AAC | 91 |
| NcoI | C|CATGG | 856 |
| StyI | C|C[AT][AT]GG | 856, 1190 |
Click here to view TAIR data
>AT2G46040.1 length:1689
ATGGCGGGTT GGTCGATGGT AGCCGACGAG GATGCCGTCG ATTATAGCAA | 50 |
GACTCCAAAG AGTCTCGATG CGAATAGGTC TCCTGAAAGC GTTAACCCAG | 100 |
AATCTACAGG GTTTGAAAAG AAGATTAAAG AACTCATCTC CTTGTTCCGA | 150 |
CCTTTGCTTG ATTCTTTTCT CGCTGAGTTT TGTTCGGCGG ATGGTTTTCT | 200 |
ACCTCTTCCT GCGATGACCG GTGAAGGAAG GACCGTTGAT TTGTTCAATC | 250 |
TCTTTTTGAA CGTGACTCAC AAAGGCGGAT TCGATGCAGT TTCTGAGAAT | 300 |
GGGTCATGGG ATGAAGTTGT TCAAGAGTCT GGATTAGAGT CTTATGACTC | 350 |
TGCATCTGCG AAATTGATCT ATGTTAAGTA TCTTGATGCA TTTGGTCGAT | 400 |
GGTTGAACAG AGTTGTTGCA GGAGATACTG ATGTTAGTAG CGTGGAGTTG | 450 |
TCTGGAATCT CTGATGCTTT GGTGGCTAGA CTTAACGGTT TTTTATCTGA | 500 |
AGTGAAAAAG AAATATGAGC TGAGGAAAGG TAGACCTGCA AAGGAGTTAG | 550 |
GAGCAGAGCT TAAATGGTTT ATTTCGAAAA CGAAGAGAAG ATATGATAAG | 600 |
CACCATGTTG GCAAAGAGTC TGCTTCGAAT GATGCTGTGA AAGAGTTTCA | 650 |
GGGATCAAAA TTGGCGGAGA GGAGACTGGA GCAGATAATG ATCCTTGAAT | 700 |
CAGTTACTCA GGAATGCTCT TCTCCTGGGA AGAGAAAACG AGAATGTCCT | 750 |
TTGGAGACAT TGAAATGGTT AAGCGATGTT GCTAAGGATC CATGTGACCC | 800 |
ATCTCTTGGT ATTGTGCCAG ATAGATCAGA GTGGGTATCT TATGGAAGTG | 850 |
AAGAGCCATG GAAACAACTT CTTCTGTTTA GGGCCTCAAG AACAAACAAT | 900 |
GATTCAGCTT GTGAAAAGAC TTGGCAGAAA GTCCAGAAGA TGCACCCATG | 950 |
CCTGTATGAT GATAGTGCTG GAGCTAGTTA CAATCTAAGA GAGAGACTGA | 1000 |
GTTACGAGGA TTACAAGAGG GGAAAGACTG GGAATGGCTC GGATATAGGC | 1050 |
AGTTCAGATG AGGAGGATAG ACCATGTGCT CTAGTTGGGT CAAAGTTTCA | 1100 |
AGCTAAAGTA CCGGAGTGGA CTGGCATAAC CCCTGAAAGT GATTCAAAGT | 1150 |
GGTTGGGCAC TCGGATCTGG CCACTGACCA AAGAACAAAC CAAGGCTAAT | 1200 |
CTTCTTATCG AAAGAGATCG TATTGGAAAA GGAAGACAAG ATCCTTGTGG | 1250 |
CTGCCATAAT CCAGGATCTA TTGAATGTGT CAAGTTTCAT ATCACTGCAA | 1300 |
AACGGGATAA ACTGAAACTT GAACTTGGTC CAGCTTTCTA CATGTGGTGT | 1350 |
TTTGATGTCA TGGGTGAATG TACTCTCCAG TATTGGACAG ACTTAGAACT | 1400 |
GAAGAAGATA AAGTCTTTGA TGAGTTCTCC ACCGTCACTT AGCCCAGCCT | 1450 |
TCATCCATCA GGCCAAGATG ATTCTTCCTT CGAAGAGCAG AGGAAAAATT | 1500 |
GTGAGCTACT TCTACAACGT GACCCTTTTG CAGTACAGAG CAAGTCAGAG | 1550 |
TAGAATAACA CCTCACGATA TAGACAGTGA TACTGATCAA ATATTCCTCC | 1600 |
GCGCAACAGA GAATGAAAAT CCAGCCCCCG AAGCAAACAC ATTTCAGAAA | 1650 |
CCCGCCCTGC TTTCGCCTAA TAAAAAAAGA TGTCGATAG | 1700 |
>AT2G46040.1 longest ORF length:562
MAGWSMVADE DAVDYSKTPK SLDANRSPES VNPESTGFEK KIKELISLFR | 50 |
PLLDSFLAEF CSADGFLPLP AMTGEGRTVD LFNLFLNVTH KGGFDAVSEN | 100 |
GSWDEVVQES GLESYDSASA KLIYVKYLDA FGRWLNRVVA GDTDVSSVEL | 150 |
SGISDALVAR LNGFLSEVKK KYELRKGRPA KELGAELKWF ISKTKRRYDK | 200 |
HHVGKESASN DAVKEFQGSK LAERRLEQIM ILESVTQECS SPGKRKRECP | 250 |
LETLKWLSDV AKDPCDPSLG IVPDRSEWVS YGSEEPWKQL LLFRASRTNN | 300 |
DSACEKTWQK VQKMHPCLYD DSAGASYNLR ERLSYEDYKR GKTGNGSDIG | 350 |
SSDEEDRPCA LVGSKFQAKV PEWTGITPES DSKWLGTRIW PLTKEQTKAN | 400 |
LLIERDRIGK GRQDPCGCHN PGSIECVKFH ITAKRDKLKL ELGPAFYMWC | 450 |
FDVMGECTLQ YWTDLELKKI KSLMSSPPSL SPAFIHQAKM ILPSKSRGKI | 500 |
VSYFYNVTLL QYRASQSRIT PHDIDSDTDQ IFLRATENEN PAPEANTFQK | 550 |
PALLSPNKKR CR | 600 |