fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46270 GBF3 G-box binding factor 3 (.1.2)

>AT2G46270.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BamHI G|GATCC 315
BglII A|GATCT 904
NcoI C|CATGG 287, 737
NdeI CA|TATG 208, 221
NheI G|CTAGC 610
PstI CTGCA|G 1139
StyI C|C[AT][AT]GG 287, 737, 1062
XbaI T|CTAGA 1021
XhoI C|TCGAG 1121


Click here to view TAIR data

>AT2G46270.1 length:1149
ATGGGAAATA GCAGCGAGGA ACCAAAGCCT CCTACCAAAT CAGATAAACC 
50
ATCTTCACCC CCGGTGGATC AAACAAATGT TCATGTCTAC CCTGATTGGG 
100
CAGCTATGCA GGCATATTAT GGTCCAAGAG TAGCAATGCC TCCTTATTAC 
150
AATTCAGCTA TGGCTGCATC TGGTCATCCT CCTCCTCCTT ACATGTGGAA 
200
TCCTCAGCAT ATGATGTCAC CATATGGAGC ACCCTATGCT GCTGTTTATC 
250
CTCATGGAGG AGGAGTTTAC GCTCATCCCG GTATTCCCAT GGGATCACTG 
300
CCTCAAGGTC AAAAGGATCC ACCTTTAACA ACTCCGGGGA CGCTTTTGAG 
350
CATCGACACT CCTACTAAAT CTACAGGGAA CACAGACAAT GGATTGATGA 
400
AGAAGCTGAA AGAGTTTGAT GGGCTTGCTA TGTCTCTAGG AAATGGGAAT 
450
CCTGAAAATG GTGCAGATGA ACATAAACGA TCACGGAACA GCTCAGAAAC 
500
TGATGGTTCT ACTGATGGAA GTGATGGGAA TACAACTGGG GCAGATGAAC 
550
CGAAACTTAA AAGAAGTCGA GAGGGAACTC CAACAAAAGA TGGGAAACAA 
600
TTGGTTCAAG CTAGCTCATT TCATTCTGTT TCTCCGTCAA GTGGTGATAC 
650
CGGCGTAAAA CTCATTCAAG GATCTGGAGC TATACTCTCT CCTGGTGTAA 
700
GTGCAAATTC CAACCCCTTC ATGTCACAAT CTTTAGCCAT GGTTCCTCCT 
750
GAAACTTGGC TTCAGAACGA GAGAGAACTG AAACGGGAGC GAAGGAAACA 
800
GTCTAATAGA GAATCTGCTA GAAGGTCAAG ATTAAGGAAA CAGGCCGAGA 
850
CAGAAGAACT TGCTAGGAAA GTGGAAGCCT TGACAGCCGA AAACATGGCA 
900
TTAAGATCTG AACTAAACCA ACTTAATGAG AAATCTGATA AACTAAGAGG 
950
AGCAAATGCA ACCTTGTTGG ACAAACTGAA ATGCTCGGAA CCCGAAAAGA 
1000
GAGTCCCCGC AAATATGTTG TCTAGAGTTA AGAACTCAGG AGCTGGAGAT 
1050
AAGAACAAGA ACCAAGGAGA CAATGATTCT AACTCTACAA GCAAATTGCA 
1100
TCAACTGCTC GATACGAAGC CTCGAGCTAA AGCAGTAGCT GCAGGCTGA
1150

>AT2G46270.1 longest ORF length:382
MGNSSEEPKP PTKSDKPSSP PVDQTNVHVY PDWAAMQAYY GPRVAMPPYY 
50
NSAMAASGHP PPPYMWNPQH MMSPYGAPYA AVYPHGGGVY AHPGIPMGSL 
100
PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN 
150
PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ 
200
LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP 
250
ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA 
300
LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD 
350
KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
400