fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46270 GBF3 G-box binding factor 3 (.1.2)

>AT2G46270.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BamHI G|GATCC 315
BglII A|GATCT 835
NcoI C|CATGG 287
NdeI CA|TATG 208, 221
NheI G|CTAGC 610
PstI CTGCA|G 1070
StyI C|C[AT][AT]GG 287, 993
XbaI T|CTAGA 952
XhoI C|TCGAG 1052


Click here to view TAIR data

>AT2G46270.2 length:1080
ATGGGAAATA GCAGCGAGGA ACCAAAGCCT CCTACCAAAT CAGATAAACC 
50
ATCTTCACCC CCGGTGGATC AAACAAATGT TCATGTCTAC CCTGATTGGG 
100
CAGCTATGCA GGCATATTAT GGTCCAAGAG TAGCAATGCC TCCTTATTAC 
150
AATTCAGCTA TGGCTGCATC TGGTCATCCT CCTCCTCCTT ACATGTGGAA 
200
TCCTCAGCAT ATGATGTCAC CATATGGAGC ACCCTATGCT GCTGTTTATC 
250
CTCATGGAGG AGGAGTTTAC GCTCATCCCG GTATTCCCAT GGGATCACTG 
300
CCTCAAGGTC AAAAGGATCC ACCTTTAACA ACTCCGGGGA CGCTTTTGAG 
350
CATCGACACT CCTACTAAAT CTACAGGGAA CACAGACAAT GGATTGATGA 
400
AGAAGCTGAA AGAGTTTGAT GGGCTTGCTA TGTCTCTAGG AAATGGGAAT 
450
CCTGAAAATG GTGCAGATGA ACATAAACGA TCACGGAACA GCTCAGAAAC 
500
TGATGGTTCT ACTGATGGAA GTGATGGGAA TACAACTGGG GCAGATGAAC 
550
CGAAACTTAA AAGAAGTCGA GAGGGAACTC CAACAAAAGA TGGGAAACAA 
600
TTGGTTCAAG CTAGCTCATT TCATTCTGTT TCTCCGTCAA GTGGTGATAC 
650
CGGCGTAAAA CTCATTCAAG GATCTGGAGC TATACTCTCT CCTGGTAACG 
700
AGAGAGAACT GAAACGGGAG CGAAGGAAAC AGTCTAATAG AGAATCTGCT 
750
AGAAGGTCAA GATTAAGGAA ACAGGCCGAG ACAGAAGAAC TTGCTAGGAA 
800
AGTGGAAGCC TTGACAGCCG AAAACATGGC ATTAAGATCT GAACTAAACC 
850
AACTTAATGA GAAATCTGAT AAACTAAGAG GAGCAAATGC AACCTTGTTG 
900
GACAAACTGA AATGCTCGGA ACCCGAAAAG AGAGTCCCCG CAAATATGTT 
950
GTCTAGAGTT AAGAACTCAG GAGCTGGAGA TAAGAACAAG AACCAAGGAG 
1000
ACAATGATTC TAACTCTACA AGCAAATTGC ATCAACTGCT CGATACGAAG 
1050
CCTCGAGCTA AAGCAGTAGC TGCAGGCTGA 
1100

>AT2G46270.2 longest ORF length:359
MGNSSEEPKP PTKSDKPSSP PVDQTNVHVY PDWAAMQAYY GPRVAMPPYY 
50
NSAMAASGHP PPPYMWNPQH MMSPYGAPYA AVYPHGGGVY AHPGIPMGSL 
100
PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN 
150
PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ 
200
LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGNERELKRE RRKQSNRESA 
250
RRSRLRKQAE TEELARKVEA LTAENMALRS ELNQLNEKSD KLRGANATLL 
300
DKLKCSEPEK RVPANMLSRV KNSGAGDKNK NQGDNDSNST SKLHQLLDTK 
350
PRAKAVAAG
400