fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46310 CRF5 cytokinin response factor 5 (.1)

>AT2G46310.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 730
StyI C|C[AT][AT]GG 316


Click here to view TAIR data

>AT2G46310.1 length:885
ATGAAAAGCC GAGTGAGAAA ATCCAAGTAC ACGGTTCACC GGAAAATCAC 
50
ATCCACACCG TTCGACGGTT TCCCGAAGAT TGTCAAAATC ATAGTCACTG 
100
ACCCATGCGC TACTGATTCT TCCAGCGATG AGGAAAACGA CAACAAATCT 
150
GTTGCTCCGA GGGTGAAACG TTATGTGGAT GAGATCAGGT TCTGTGACGA 
200
AGATGACGAA CCTAAACCGG CGAGGAAAGC GAAGAAAAAG TCCCCGGCGG 
250
CTGCGGCGGA GAACGGTGGA GATTTGGTAA AGTCTGTGGT GAAGTATAGA 
300
GGAGTGAGAC AACGACCTTG GGGAAAATTT GCGGCGGAGA TTCGTGATCC 
350
TTCGAGTCGT ACTAGACTCT GGCTTGGGAC TTTTGCGACG GCGGAGGAAG 
400
CTGCTATAGG TTACGATAGA GCCGCGATTC GAATCAAAGG TCATAACGCT 
450
CAGACGAATT TTCTCACTCC TCCTCCTAGT CCGACGACTG AGGTGTTACC 
500
GGAAACTCCG GTGATTGACC TTGAAACTGT CTCTGGTTGT GATTCGGCGA 
550
GGGAATCGCA AATCAGTCTG TGTTCTCCGA CTTCTGTTCT CCGGTTTAGT 
600
CACAACGACG AAACAGAGTA CAGAACAGAG CCAACGGAAG AACAAAATCC 
650
GTTTTTCTTG CCTGATTTGT TTCGCTCCGG AGATTATTTT TGGGATTCCG 
700
AAATTACCCC TGACCCTTTG TTTCTCGACG AATTCCACCA GTCCTTGTTA 
750
CCAAACATCA ACAACAACAA CACAGTGTGT GATAAGGATA CGAATCTGTC 
800
TGATAGTTTT CCGTTGGGAG TGATCGGAGA TTTCAGCTCA TGGGATGTTG 
850
ATGAGTTTTT CCAAGATCAT TTGTTGGATA AGTAA
900

>AT2G46310.1 longest ORF length:294
MKSRVRKSKY TVHRKITSTP FDGFPKIVKI IVTDPCATDS SSDEENDNKS 
50
VAPRVKRYVD EIRFCDEDDE PKPARKAKKK SPAAAAENGG DLVKSVVKYR 
100
GVRQRPWGKF AAEIRDPSSR TRLWLGTFAT AEEAAIGYDR AAIRIKGHNA 
150
QTNFLTPPPS PTTEVLPETP VIDLETVSGC DSARESQISL CSPTSVLRFS 
200
HNDETEYRTE PTEEQNPFFL PDLFRSGDYF WDSEITPDPL FLDEFHQSLL 
250
PNINNNNTVC DKDTNLSDSF PLGVIGDFSS WDVDEFFQDH LLDK
300