| Locus |
Common name |
Short description |
| AT2G46410 |
CPC |
CAPRICE, Homeodomain-like superfamily protein (.1) |
>AT2G46410.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DdeI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HindIII, HinfI, HpaI, HphI, HpyCH4III, HpyCH4IV, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, MwoI, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NlaIII, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TfiI, TliI, TseI, Tsp45I, Tsp509I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AluI
| AG|CT |
100 |
| AvaI
| C|PyCGPuG |
192 |
| BamHI
| G|GATCC |
188 |
| BglII
| A|GATCT |
129 |
| BsaHI
| GPu|CGPyC |
201, 241 |
| BsaJI
| C|CNNGG |
59, 192 |
| BsoBI
| C|PyCGPuG |
192 |
| BssKI
| |CCNGG |
191 |
| BstF5I
| GGATGNN| |
144 |
| BstYI
| Pu|GATCPy |
129, 188 |
| DpnI
| GA-CH3|TC |
128, 175, 187 |
| DpnII
| |GATC |
128, 175, 187 |
| HpaII
| C|CGG |
180, 191, 203 |
| Hpy188I
| TCN|GA |
9, 72, 114, 140 |
| Hpy99I
| CG[AT]CG| |
36, 242 |
| MboI
| |GATC |
128, 175, 187 |
| MspI
| C|CGG |
180, 191, 203 |
| NciI
| CC|[CG]GG |
191 |
| NlaIV
| GGN|NCC |
188 |
| Sau3AI
| |GATC |
128, 175, 187 |
| ScrFI
| CC|NGG |
191 |
| SmaI
| CCC|GGG |
192 |
| StyI
| C|C[AT][AT]GG |
59 |
| Taqƒ¿I
| T|CGA |
90 |
| XmaI
| C|CCGGG |
192 |
Click here to view TAIR data
>AT2G46410.1 length:285
ATGTTTCGTT CAGACAAGGC GGAAAAAATG GATAAACGAC GACGGAGACA | 50 |
GAGCAAAGCC AAGGCTTCTT GTTCCGAAGA GGTGAGTAGT ATCGAATGGG | 100 |
AAGCTGTGAA GATGTCAGAA GAAGAAGAAG ATCTCATTTC TCGGATGTAT | 150 |
AAACTCGTTG GCGACAGGTG GGAGTTGATC GCCGGAAGGA TCCCGGGACG | 200 |
GACGCCGGAG GAGATAGAGA GATATTGGCT TATGAAACAC GGCGTCGTTT | 250 |
TTGCCAACAG ACGAAGAGAC TTTTTTAGGA AATGA | 300 |
>AT2G46410.1 longest ORF length:94
MFRSDKAEKM DKRRRRQSKA KASCSEEVSS IEWEAVKMSE EEEDLISRMY | 50 |
KLVGDRWELI AGRIPGRTPE EIERYWLMKH GVVFANRRRD FFRK | 100 |
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