fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46510 ATAIB, bHLH107, bHLH017, INU1, JAM1, MYL1 ABA-inducible BHLH-type transcription factor (.1)

>AT2G46510.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 1596
HindIII A|AGCTT 382, 707, 781, 1216, 1615
HpaI GTT|AAC 556
PvuII CAG|CTG 192
SacI GAGCT|C 806
XbaI T|CTAGA 229


Click here to view TAIR data

>AT2G46510.1 length:1701
ATGAATATGA GTGATTTAGG TTGGGATGAT GAAGATAAAT CGGTGGTTAG 
50
TGCTGTTTTA GGGCATTTAG CTTCTGATTT TCTTCGAGCA AACTCTAATT 
100
CGAATCAGAA TCTCTTTCTT GTTATGGGAA CTGATGATAC TCTGAATAAG 
150
AAGCTCTCTA GTCTCGTTGA TTGGCCAAAC TCGGAGAATT TCAGCTGGAA 
200
CTACGCTATT TTCTGGCAAC AAACCATGTC TAGATCCGGA CAACAAGTCT 
250
TAGGTTGGGG AGATGGGTGT TGTCGAGAGC CTAATGAGGA AGAGGAATCA 
300
AAAGTTGTTA GGTCTTATAA TTTTAACAAC ATGGGGGCAG AGGAAGAGAC 
350
ATGGCAAGAT ATGAGGAAGA GAGTGTTGCA GAAGCTTCAT AGGTTGTTTG 
400
GTGGATCTGA TGAAGACAAT TATGCTTTGA GCTTAGAGAA AGTTACTGCT 
450
ACTGAGATTT TCTTCTTAGC TTCCATGTAT TTCTTCTTCA ATCACGGTGA 
500
AGGCGGTCCT GGGAGGTGTT ATTCTTCAGG GAAACATGTG TGGCTCTCTG 
550
ATGCAGTTAA CTCTGAGTCT GACTATTGTT TCAGGTCTTT TATGGCGAAA 
600
TCTGCGGGAA TCAGAACGAT CGTTATGGTT CCTACTGATG CTGGTGTTCT 
650
TGAGCTTGGT TCTGTTTGGT CTTTGCCTGA AAACATTGGC TTGGTTAAGT 
700
CTGTTCAAGC TTTGTTCATG AGGAGAGTTA CGCAACCAGT AATGGTGACT 
750
TCAAACACTA ACATGACTGG AGGGATTCAC AAGCTTTTCG GGCAGGATTT 
800
GAGTGGAGCT CACGCGTATC CTAAGAAGCT CGAAGTGAGA AGAAACTTGG 
850
ATGAGAGATT CACTCCTCAA AGTTGGGAAG GCTATAATAA CAATAAAGGT 
900
CCAACATTTG GTTACACACC TCAGAGGGAT GATGTGAAAG TGCTAGAGAA 
950
TGTGAATATG GTTGTAGATA ATAACAATTA CAAGACGCAG ATTGAGTTTG 
1000
CGGGATCATC AGTTGCTGCT TCTTCGAATC CATCTACAAA CACTCAGCAA 
1050
GAAAAATCAG AATCTTGTAC AGAGAAAAGA CCAGTGAGCT TGTTAGCAGG 
1100
AGCAGGAATA GTTTCTGTTG TTGATGAGAA GAGACCGAGA AAGAGAGGGA 
1150
GAAAGCCTGC AAACGGAAGA GAAGAGCCAT TGAACCATGT GGAAGCTGAG 
1200
AGGCAGAGAC GCGAGAAGCT TAACCAAAGA TTCTACGCTT TACGATCAGT 
1250
TGTTCCAAAC ATTTCTAAAA TGGACAAGGC TTCTCTACTT GGAGACGCAA 
1300
TTTCTTACAT CAAAGAGCTT CAAGAGAAAG TCAAGATAAT GGAAGATGAA 
1350
AGAGTAGGAA CAGATAAGAG CTTATCAGAA TCAAACACAA TAACAGTAGA 
1400
AGAAAGTCCA GAAGTTGACA TTCAAGCTAT GAATGAAGAG GTTGTTGTAA 
1450
GAGTAATCTC GCCTTTGGAT TCACATCCAG CTTCAAGAAT CATACAAGCA 
1500
ATGAGAAACT CAAATGTTAG TCTAATGGAG GCTAAGTTAT CATTAGCTGA 
1550
AGACACAATG TTTCACACTT TTGTGATAAA GTCTAACAAC GGGTCGGATC 
1600
CATTGACGAA AGAGAAGCTT ATAGCAGCGT TTTACCCCGA GACCAGCTCG 
1650
ACGCAACCGC CATTGCCTTC TTCTAGTTCA CAGGTCTCTG GTGATATATA 
1700
A
1750

>AT2G46510.1 longest ORF length:566
MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK 
50
KLSSLVDWPN SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES 
100
KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA 
150
TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK 
200
SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT 
250
SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG 
300
PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ 
350
EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE 
400
RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE 
450
RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA 
500
MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS 
550
TQPPLPSSSS QVSGDI
600