fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46530 ARF11 auxin response factor 11 (.1.2.3)

>AT2G46530.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 501, 942
HindIII A|AGCTT 71
KpnI GGTAC|C 922
NcoI C|CATGG 1663
StyI C|C[AT][AT]GG 796, 1663


Click here to view TAIR data

>AT2G46530.1 length:1806
ATGGCGAATG TGGAAGCTGA TTTCAGAACA TCAGGGTCTA ATGATGATGA 
50
ATTGTACACG GAGCTATGGA AAGCTTGTGC AGGGCCACTT GTGGAAGTTC 
100
CTCGTTATGG TGAAAGAGTT TTCTACTTCC CTCAAGGTCA CATGGAACAA 
150
TTGGTTGCTT CGACTAATCA AGGAGTTGTT GATCAAGAGA TACCAGTGTT 
200
TAATCTTCCT CCAAAGATAC TTTGTCGTGT TCTTAGTGTT ACGTTAAAAG 
250
CAGAACATGA GACCGATGAG GTTTACGCTC AGATCACATT ACAACCAGAA 
300
GAAGATCAAA GTGAACCAAC AAGTCTTGAC CCACCTTTAG TAGAACCAGC 
350
TAAACCAACG GTTGATTCTT TTGTGAAGAT TCTAACAGCT TCAGATACAA 
400
GCACACATGG TGGATTCTCT GTTCTTCGTA AACACGCCAC TGAGTGTTTA 
450
CCTTCACTTG ATATGACACA ACCTACACCG ACTCAAGAAC TTGTAGCTAG 
500
AGATCTTCAC GGCTATGAAT GGAGGTTTAA GCATATATTT AGAGGGCAAC 
550
CGAGGAGGCA TTTACTTACA ACCGGTTGGA GTACATTTGT AACCTCGAAA 
600
AGACTTGTAG CTGGAGATGC ATTTGTGTTC TTGAGGGGTG AAACCGGGGA 
650
TTTACGGGTT GGTGTGAGGC GTTTAGCTAA GCAGCAAAGC ACGATGCCCG 
700
CATCCGTTAT TTCGAGTCAG AGTATGCGTT TGGGAGTTCT TGCTACAGCT 
750
TCTCATGCTG TTACCACAAC AACTATATTT GTTGTCTTCT ATAAACCAAG 
800
GATAAGCCAG TTTATAATTA GTGTGAACAA GTATATGATG GCGATGAAGA 
850
ACGGGTTTTC TCTCGGTATG CGGTATAGGA TGAGATTCGA AGGAGAAGAG 
900
TCTCCTGAGA GAATATTTAC AGGTACCATT ATTGGCAGTG GAGATCTATC 
950
TTCTCAATGG CCAGCTTCCA AATGGAGGTC ATTGCAGATC CAATGGGACG 
1000
AGCCATCTTC TATACAGAGA CCAAACAAGG TCTCACCGTG GGAGATCGAG 
1050
CCTTTCTCAC CATCCGCGCT TACACCAACC CCTACTCAAC AACAATCAAA 
1100
GTCCAAACGG TCCAGACCAA TCTCAGAAAT CACAGGGAGT CCTGTAGCTT 
1150
CTAGTTTCTT GAGTAGTTTC TCGCAGAGCC ACGAGTCTAA TCCATCGGTC 
1200
AAACTGTTGT TTCAAGATCC AGCAACCGAG AGAAACTCAA ACAAATCAGT 
1250
GTTTTCAAGT GGATTACAAT GCAAGATAAC CGAGGCTCCG GTCACAAGTA 
1300
GTTGTAGGTT ATTCGGATTC GATCTCACGA GCAAGCCTGC TTCTGCTACA 
1350
ATTCCTCATG ACAAGCAGCT AATAAGTGTG GATTCAAATA TATCTGATTC 
1400
TACCACCAAG TGTCAAGATC CTAACTCTTC AAACTCACCA AAAGAGCAGA 
1450
AACAACAAAC ATCCACAAGA AGCCGAATCA AGGTGCAAAT GCAAGGAACA 
1500
GCGGTTGGAC GCGCGGTTGA TTTAACATTG TTGAGATCAT ACGATGAACT 
1550
AATAAAAGAG CTAGAGAAAA TGTTTGAGAT TGAAGGAGAA CTTAGTCCTA 
1600
AAGACAAATG GGCTATCGTG TTTACAGACG ATGAAGGAGA TAGGATGCTT 
1650
GTAGGAGATG ATCCATGGAA TGAGTTCTGT AAAATGGCAA AGAAGTTATT 
1700
CATATATCCG AGTGATGAGG TCAAGAAAAT GAGGTCGAAG TCGTTGTTGG 
1750
GTGATAAAGG TACGATCGTA AATCTTGAAT CAGATCAGAG GACAGTTCAC 
1800
GTTTAA
1850

>AT2G46530.1 longest ORF length:601
MANVEADFRT SGSNDDELYT ELWKACAGPL VEVPRYGERV FYFPQGHMEQ 
50
LVASTNQGVV DQEIPVFNLP PKILCRVLSV TLKAEHETDE VYAQITLQPE 
100
EDQSEPTSLD PPLVEPAKPT VDSFVKILTA SDTSTHGGFS VLRKHATECL 
150
PSLDMTQPTP TQELVARDLH GYEWRFKHIF RGQPRRHLLT TGWSTFVTSK 
200
RLVAGDAFVF LRGETGDLRV GVRRLAKQQS TMPASVISSQ SMRLGVLATA 
250
SHAVTTTTIF VVFYKPRISQ FIISVNKYMM AMKNGFSLGM RYRMRFEGEE 
300
SPERIFTGTI IGSGDLSSQW PASKWRSLQI QWDEPSSIQR PNKVSPWEIE 
350
PFSPSALTPT PTQQQSKSKR SRPISEITGS PVASSFLSSF SQSHESNPSV 
400
KLLFQDPATE RNSNKSVFSS GLQCKITEAP VTSSCRLFGF DLTSKPASAT 
450
IPHDKQLISV DSNISDSTTK CQDPNSSNSP KEQKQQTSTR SRIKVQMQGT 
500
AVGRAVDLTL LRSYDELIKE LEKMFEIEGE LSPKDKWAIV FTDDEGDRML 
550
VGDDPWNEFC KMAKKLFIYP SDEVKKMRSK SLLGDKGTIV NLESDQRTVH 
600
V
650