fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46530 ARF11 auxin response factor 11 (.1.2.3)

>AT2G46530.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 564, 1005
HindIII A|AGCTT 12, 43, 134
KpnI GGTAC|C 985
NcoI C|CATGG 1726
StyI C|C[AT][AT]GG 859, 1726


Click here to view TAIR data

>AT2G46530.3 length:1869
ATGAGCCAAA CAAGCTTAGA GCCACTTATA ATTTCTATTA TAAAGCTTCA 
50
AATTTTGCAA CTTTGGTTGA AATTGATAGC TGTTGGTTGG AATTTAGGGT 
100
CTAATGATGA TGAATTGTAC ACGGAGCTAT GGAAAGCTTG TGCAGGGCCA 
150
CTTGTGGAAG TTCCTCGTTA TGGTGAAAGA GTTTTCTACT TCCCTCAAGG 
200
TCACATGGAA CAATTGGTTG CTTCGACTAA TCAAGGAGTT GTTGATCAAG 
250
AGATACCAGT GTTTAATCTT CCTCCAAAGA TACTTTGTCG TGTTCTTAGT 
300
GTTACGTTAA AAGCAGAACA TGAGACCGAT GAGGTTTACG CTCAGATCAC 
350
ATTACAACCA GAAGAAGATC AAAGTGAACC AACAAGTCTT GACCCACCTT 
400
TAGTAGAACC AGCTAAACCA ACGGTTGATT CTTTTGTGAA GATTCTAACA 
450
GCTTCAGATA CAAGCACACA TGGTGGATTC TCTGTTCTTC GTAAACACGC 
500
CACTGAGTGT TTACCTTCAC TTGATATGAC ACAACCTACA CCGACTCAAG 
550
AACTTGTAGC TAGAGATCTT CACGGCTATG AATGGAGGTT TAAGCATATA 
600
TTTAGAGGGC AACCGAGGAG GCATTTACTT ACAACCGGTT GGAGTACATT 
650
TGTAACCTCG AAAAGACTTG TAGCTGGAGA TGCATTTGTG TTCTTGAGGG 
700
GTGAAACCGG GGATTTACGG GTTGGTGTGA GGCGTTTAGC TAAGCAGCAA 
750
AGCACGATGC CCGCATCCGT TATTTCGAGT CAGAGTATGC GTTTGGGAGT 
800
TCTTGCTACA GCTTCTCATG CTGTTACCAC AACAACTATA TTTGTTGTCT 
850
TCTATAAACC AAGGATAAGC CAGTTTATAA TTAGTGTGAA CAAGTATATG 
900
ATGGCGATGA AGAACGGGTT TTCTCTCGGT ATGCGGTATA GGATGAGATT 
950
CGAAGGAGAA GAGTCTCCTG AGAGAATATT TACAGGTACC ATTATTGGCA 
1000
GTGGAGATCT ATCTTCTCAA TGGCCAGCTT CCAAATGGAG GTCATTGCAG 
1050
ATCCAATGGG ACGAGCCATC TTCTATACAG AGACCAAACA AGGTCTCACC 
1100
GTGGGAGATC GAGCCTTTCT CACCATCCGC GCTTACACCA ACCCCTACTC 
1150
AACAACAATC AAAGTCCAAA CGGTCCAGAC CAATCTCAGA AATCACAGGG 
1200
AGTCCTGTAG CTTCTAGTTT CTTGAGTAGT TTCTCGCAGA GCCACGAGTC 
1250
TAATCCATCG GTCAAACTGT TGTTTCAAGA TCCAGCAACC GAGAGAAACT 
1300
CAAACAAATC AGTGTTTTCA AGTGGATTAC AATGCAAGAT AACCGAGGCT 
1350
CCGGTCACAA GTAGTTGTAG GTTATTCGGA TTCGATCTCA CGAGCAAGCC 
1400
TGCTTCTGCT ACAATTCCTC ATGACAAGCA GCTAATAAGT GTGGATTCAA 
1450
ATATATCTGA TTCTACCACC AAGTGTCAAG ATCCTAACTC TTCAAACTCA 
1500
CCAAAAGAGC AGAAACAACA AACATCCACA AGAAGCCGAA TCAAGGTGCA 
1550
AATGCAAGGA ACAGCGGTTG GACGCGCGGT TGATTTAACA TTGTTGAGAT 
1600
CATACGATGA ACTAATAAAA GAGCTAGAGA AAATGTTTGA GATTGAAGGA 
1650
GAACTTAGTC CTAAAGACAA ATGGGCTATC GTGTTTACAG ACGATGAAGG 
1700
AGATAGGATG CTTGTAGGAG ATGATCCATG GAATGAGTTC TGTAAAATGG 
1750
CAAAGAAGTT ATTCATATAT CCGAGTGATG AGGTCAAGAA AATGAGGTCG 
1800
AAGTCGTTGT TGGGTGATAA AGGTACGATC GTAAATCTTG AATCAGATCA 
1850
GAGGACAGTT CACGTTTAA
1900

>AT2G46530.3 longest ORF length:622
MSQTSLEPLI ISIIKLQILQ LWLKLIAVGW NLGSNDDELY TELWKACAGP 
50
LVEVPRYGER VFYFPQGHME QLVASTNQGV VDQEIPVFNL PPKILCRVLS 
100
VTLKAEHETD EVYAQITLQP EEDQSEPTSL DPPLVEPAKP TVDSFVKILT 
150
ASDTSTHGGF SVLRKHATEC LPSLDMTQPT PTQELVARDL HGYEWRFKHI 
200
FRGQPRRHLL TTGWSTFVTS KRLVAGDAFV FLRGETGDLR VGVRRLAKQQ 
250
STMPASVISS QSMRLGVLAT ASHAVTTTTI FVVFYKPRIS QFIISVNKYM 
300
MAMKNGFSLG MRYRMRFEGE ESPERIFTGT IIGSGDLSSQ WPASKWRSLQ 
350
IQWDEPSSIQ RPNKVSPWEI EPFSPSALTP TPTQQQSKSK RSRPISEITG 
400
SPVASSFLSS FSQSHESNPS VKLLFQDPAT ERNSNKSVFS SGLQCKITEA 
450
PVTSSCRLFG FDLTSKPASA TIPHDKQLIS VDSNISDSTT KCQDPNSSNS 
500
PKEQKQQTST RSRIKVQMQG TAVGRAVDLT LLRSYDELIK ELEKMFEIEG 
550
ELSPKDKWAI VFTDDEGDRM LVGDDPWNEF CKMAKKLFIY PSDEVKKMRS 
600
KSLLGDKGTI VNLESDQRTV HV
650