fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46590 DAG2, AtDof2,5 DOF AFFECTING GERMINATION 2, Dof-type zinc finger DNA-binding family protein (.1.2)

>AT2G46590.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 420, 483
NdeI CA|TATG 538


Click here to view TAIR data

>AT2G46590.1 length:1074
ATGATGAACG TTAAACCAAT GGAGCAGATC ATGATTCCTA ATAACAACAC 
50
ACATCAACCA AACACCACAT CCAATGCAAG GCCAAACACC ATTCTCACAT 
100
CTAACGGCGT CTCAACTGCT GGAGCAACCG TCTCCGGCGT AAGCAACAAC 
150
AATAACAATA CGGCGGTTGT GGCGGAGAGG AAAGCAAGAC CACAAGAGAA 
200
ACTAAATTGT CCAAGATGCA ACTCAACCAA CACAAAGTTT TGTTACTACA 
250
ACAACTATAG TCTCACACAA CCAAGATACT TCTGCAAAGG TTGTCGAAGG 
300
TATTGGACCG AAGGTGGATC TCTTAGGAAT GTTCCTGTGG GAGGAAGCTC 
350
AAGAAAGAAC AAGAGATCAT CTTCATCTTC TTCATCAAAC ATCCTTCAGA 
400
CAATACCATC TTCACTTCCA GATCTAAACC CGCCAATACT CTTCTCAAAC 
450
CAAATCCATA ATAAATCGAA AGGGTCATCA CAAGATCTCA ACTTGTTGTC 
500
TTTCCCAGTC ATGCAAGATC AACATCATCA TCATGTCCAT ATGTCTCAGT 
550
TTCTTCAGAT GCCTAAGATG GAGGGAAATG GTAACATAAC TCATCAGCAG 
600
CAGCCTTCAT CATCTTCTTC TGTCTATGGT TCCTCGTCGT CTCCTGTTTC 
650
AGCTCTTGAA CTTTTAAGAA CCGGAGTTAA TGTTTCTTCA AGATCAGGGA 
700
TTAACTCATC GTTCATGCCT TCCGGTTCAA TGATGGATTC AAACACTGTG 
750
CTTTACACTT CTTCAGGGTT TCCAACAATG GTGGATTACA AGCCAAGTAA 
800
TCTCTCCTTC TCTACCGATC ATCAAGGGCT TGGACACAAT AGCAACAATA 
850
GGTCTGAAGC TCTTCATAGT GATCATCACC AACAAGGTAG AGTTTTGTTT 
900
CCATTTGGGG ATCAAATGAA GGAGCTTTCA TCAAGCATAA CACAAGAAGT 
950
TGATCATGAT GATAATCAAC AACAGAAGAG TCATGGAAAT AATAATAATA 
1000
ATAATAACTC AAGCCCTAAT AATGGATATT GGAGTGGGAT GTTCAGTACT 
1050
ACAGGAGGAG GATCTTCATG GTGA
1100

>AT2G46590.1 longest ORF length:357
MMNVKPMEQI MIPNNNTHQP NTTSNARPNT ILTSNGVSTA GATVSGVSNN 
50
NNNTAVVAER KARPQEKLNC PRCNSTNTKF CYYNNYSLTQ PRYFCKGCRR 
100
YWTEGGSLRN VPVGGSSRKN KRSSSSSSSN ILQTIPSSLP DLNPPILFSN 
150
QIHNKSKGSS QDLNLLSFPV MQDQHHHHVH MSQFLQMPKM EGNGNITHQQ 
200
QPSSSSSVYG SSSSPVSALE LLRTGVNVSS RSGINSSFMP SGSMMDSNTV 
250
LYTSSGFPTM VDYKPSNLSF STDHQGLGHN SNNRSEALHS DHHQQGRVLF 
300
PFGDQMKELS SSITQEVDHD DNQQQKSHGN NNNNNNSSPN NGYWSGMFST 
350
TGGGSSW
400