fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46590 DAG2, AtDof2,5 DOF AFFECTING GERMINATION 2, Dof-type zinc finger DNA-binding family protein (.1.2)

>AT2G46590.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 456, 519
NdeI CA|TATG 574


Click here to view TAIR data

>AT2G46590.2 length:1110
ATGGACGCTA CGAAGTGGAC ACAGGGTTTT CAAGAAATGA TGAACGTTAA 
50
ACCAATGGAG CAGATCATGA TTCCTAATAA CAACACACAT CAACCAAACA 
100
CCACATCCAA TGCAAGGCCA AACACCATTC TCACATCTAA CGGCGTCTCA 
150
ACTGCTGGAG CAACCGTCTC CGGCGTAAGC AACAACAATA ACAATACGGC 
200
GGTTGTGGCG GAGAGGAAAG CAAGACCACA AGAGAAACTA AATTGTCCAA 
250
GATGCAACTC AACCAACACA AAGTTTTGTT ACTACAACAA CTATAGTCTC 
300
ACACAACCAA GATACTTCTG CAAAGGTTGT CGAAGGTATT GGACCGAAGG 
350
TGGATCTCTT AGGAATGTTC CTGTGGGAGG AAGCTCAAGA AAGAACAAGA 
400
GATCATCTTC ATCTTCTTCA TCAAACATCC TTCAGACAAT ACCATCTTCA 
450
CTTCCAGATC TAAACCCGCC AATACTCTTC TCAAACCAAA TCCATAATAA 
500
ATCGAAAGGG TCATCACAAG ATCTCAACTT GTTGTCTTTC CCAGTCATGC 
550
AAGATCAACA TCATCATCAT GTCCATATGT CTCAGTTTCT TCAGATGCCT 
600
AAGATGGAGG GAAATGGTAA CATAACTCAT CAGCAGCAGC CTTCATCATC 
650
TTCTTCTGTC TATGGTTCCT CGTCGTCTCC TGTTTCAGCT CTTGAACTTT 
700
TAAGAACCGG AGTTAATGTT TCTTCAAGAT CAGGGATTAA CTCATCGTTC 
750
ATGCCTTCCG GTTCAATGAT GGATTCAAAC ACTGTGCTTT ACACTTCTTC 
800
AGGGTTTCCA ACAATGGTGG ATTACAAGCC AAGTAATCTC TCCTTCTCTA 
850
CCGATCATCA AGGGCTTGGA CACAATAGCA ACAATAGGTC TGAAGCTCTT 
900
CATAGTGATC ATCACCAACA AGGTAGAGTT TTGTTTCCAT TTGGGGATCA 
950
AATGAAGGAG CTTTCATCAA GCATAACACA AGAAGTTGAT CATGATGATA 
1000
ATCAACAACA GAAGAGTCAT GGAAATAATA ATAATAATAA TAACTCAAGC 
1050
CCTAATAATG GATATTGGAG TGGGATGTTC AGTACTACAG GAGGAGGATC 
1100
TTCATGGTGA 
1150

>AT2G46590.2 longest ORF length:369
MDATKWTQGF QEMMNVKPME QIMIPNNNTH QPNTTSNARP NTILTSNGVS 
50
TAGATVSGVS NNNNNTAVVA ERKARPQEKL NCPRCNSTNT KFCYYNNYSL 
100
TQPRYFCKGC RRYWTEGGSL RNVPVGGSSR KNKRSSSSSS SNILQTIPSS 
150
LPDLNPPILF SNQIHNKSKG SSQDLNLLSF PVMQDQHHHH VHMSQFLQMP 
200
KMEGNGNITH QQQPSSSSSV YGSSSSPVSA LELLRTGVNV SSRSGINSSF 
250
MPSGSMMDSN TVLYTSSGFP TMVDYKPSNL SFSTDHQGLG HNSNNRSEAL 
300
HSDHHQQGRV LFPFGDQMKE LSSSITQEVD HDDNQQQKSH GNNNNNNNSS 
350
PNNGYWSGMF STTGGGSSW
400