Locus |
Common name |
Short description |
AT2G46680 |
ATHB7, ATHB-7 |
ARABIDOPSIS THALIANA HOMEOBOX 7, homeobox 7 (.1.2) |
>AT2G46680.2 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, HpyCH4III, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, SwaI, Tth111I, XbaI, XcmI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AluI
| AG|CT |
184, 192, 261, 343, 658 |
AvaI
| C|PyCGPuG |
265 |
AvaII
| G|G[AT]CC |
725 |
BanII
| GPuGCPy|C |
242 |
BclI
| T|GATCA |
549 |
BfaI
| C|TAG |
186, 194 |
BsaJI
| C|CNNGG |
166, 208, 748 |
BsaWI
| [AT]|CCGG[AT] |
473, 486, 501 |
BslI
| CCNNNNN|NNGG |
752 |
BsoBI
| C|PyCGPuG |
265 |
Bsp1286I
| G[GAT]GC[CAT]|C |
242 |
BspHI
| T|CATGA |
450, 555, 766 |
BsrI
| ACTGGN| |
129 |
BtsI
| GCAGTGNN| |
407 |
DdeI
| C|TNAG |
148, 271, 285, 313, 355, 435 |
DpnI
| GA-CH3|TC |
118, 416, 548, 632 |
DpnII
| |GATC |
118, 416, 548, 632 |
Fnu4HI
| GC|NGC |
203, 260, 439 |
HindIII
| A|AGCTT |
344 |
HinfI
| G|ANTC |
144, 321, 453 |
HpaII
| C|CGG |
23, 472, 485, 500 |
Hpy188I
| TCN|GA |
95, 147, 230, 286, 354, 456, 681, 705 |
Hpy99I
| CG[AT]CG| |
110, 373 |
HpyCH4V
| TG|CA |
201 |
MboI
| |GATC |
118, 416, 548, 632 |
MseI
| T|TAA |
326, 638 |
MslI
| CAPyNN|NNPuTG |
560 |
MspA1I
| C[AC]G|C[GT]G |
659 |
MspI
| C|CGG |
23, 472, 485, 500 |
MwoI
| GCNNNNN|NNGC |
200, 429 |
N.BstNBI
| GAGTCNNNN|N |
149, 326 |
NlaIII
| CATG| |
55, 449, 533, 554, 765 |
PaeR7I
| C|TCGAG |
265 |
PvuII
| CAG|CTG |
659 |
RsaI
| GT|AC |
274 |
Sau3AI
| |GATC |
118, 416, 548, 632 |
Sau96I
| G|GNCC |
725 |
SmlI
| C|TPyPuAG |
160, 265 |
SspI
| AAT|ATT |
17 |
StyI
| C|C[AT][AT]GG |
166, 748 |
Taqƒ¿I
| T|CGA |
264, 318 |
TfiI
| G|A[AT]TC |
453 |
TliI
| C|TCGAG |
265 |
TseI
| G|C[AT]GC |
203, 260, 439 |
Tsp45I
| |GT[CG]AC |
125 |
Tsp509I
| |AATT |
180, 740 |
TspRI
| NNCA[CG]TGNN| |
129, 407 |
XhoI
| C|TCGAG |
265 |
Click here to view TAIR data
>AT2G46680.2 length:771
ATGACAGAAG GTGGAGAATA TTCTCCGGCG ATGATGTCAG CAGAGCCATT | 50 |
CTTGACCATG AAGAAGATGA AGAAGAGCAA CCACAACAAG AACAATCAGA | 100 |
GAAGGTTTAG CGACGAGCAG ATCAAGTCAC TGGAGATGAT GTTTGAGTCT | 150 |
GAGACAAGGC TTGAGCCAAG GAAGAAGGTT CAATTAGCTA GAGAGCTAGG | 200 |
GTTGCAGCCG AGGCAAGTGG CTATATGGTT TCAGAACAAG AGGGCTCGTT | 250 |
GGAAATCCAA GCAGCTCGAG ACTGAGTACA ACATTCTCAG ACAAAACTAC | 300 |
GACAACTTGG CTTCTCAGTT CGAGTCCTTA AAGAAAGAAA AACAAGCTTT | 350 |
AGTCTCTGAG AGGCTAAAAG AGGCGACGCA AAAGAAGACA CAGGAGGAGG | 400 |
AAAGGCAGTG TAGTGGAGAT CAAGCGGTGG TTGCTCTAAG CAGCACACAT | 450 |
CATGAATCAG AAAACGAAGA GAACCGGAGG CGTAAACCGG AAGAGGTTAG | 500 |
ACCGGAGATG GAGATGAAAG ATGATAAGGG TCATCATGGG GTTATGTGTG | 550 |
ATCATCATGA TTATGAAGAT GATGATAATG GTTATAGTAA CAACATCAAG | 600 |
AGAGAGTATT TTGGTGGGTT TGAGGAAGAA CCAGATCACT TAATGAACAT | 650 |
TGTTGAACCA GCTGATAGTT GTTTGACATC ATCTGATGAT TGGAGAGGTT | 700 |
TCAAATCAGA TACTACTACT CTCTTGGACC AATCCAGCAA CAATTACCCT | 750 |
TGGCGGGATT TTTGGTCATG A | 800 |
>AT2G46680.2 longest ORF length:256
MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES | 50 |
ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY | 100 |
DNLASQFESL KKEKQALVSE RLKEATQKKT QEEERQCSGD QAVVALSSTH | 150 |
HESENEENRR RKPEEVRPEM EMKDDKGHHG VMCDHHDYED DDNGYSNNIK | 200 |
REYFGGFEEE PDHLMNIVEP ADSCLTSSDD WRGFKSDTTT LLDQSSNNYP | 250 |
WRDFWS | 300 |
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