fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46770 NST1, ANAC043, EMB2301 NAC SECONDARY WALL THICKENING PROMOTING FACTOR1, Arabidopsis NAC domain containing protein 43, NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1)

>AT2G46770.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 626, 673
SacI GAGCT|C 383
SalI G|TCGAC 808
StyI C|C[AT][AT]GG 172
XhoI C|TCGAG 166


Click here to view TAIR data

>AT2G46770.1 length:1098
ATGATGTCAA AATCTATGAG CATATCAGTG AACGGACAAT CTCAAGTGCC 
50
TCCTGGGTTT AGGTTTCATC CGACCGAGGA AGAGCTGTTG CAGTATTATC 
100
TCCGGAAGAA AGTTAATAGC ATCGAGATCG ATCTTGATGT CATTCGCGAC 
150
GTTGATCTCA ACAAGCTCGA GCCTTGGGAC ATTCAAGAGA TGTGTAAAAT 
200
AGGAACAACG CCACAAAACG ACTGGTATTT CTTTAGCCAC AAGGACAAAA 
250
AATATCCGAC GGGAACGAGA ACTAACAGAG CCACTGCGGC TGGATTTTGG 
300
AAAGCAACTG GCCGCGACAA GATCATATAT AGCAATGGCC GTAGAATTGG 
350
GATGAGAAAG ACTCTTGTTT TCTACAAAGG CCGAGCTCCT CACGGCCAAA 
400
AATCTGATTG GATCATGCAT GAATATAGAC TCGATGACAA CATTATTTCC 
450
CCCGAGGATG TCACCGTTCA TGAGGTCGTG AGTATTATAG GGGAAGCATC 
500
ACAAGACGAA GGATGGGTGG TGTGTCGTAT TTTCAAGAAG AAGAATCTTC 
550
ACAAAACCCT AAACAGTCCC GTCGGAGGAG CTTCCCTGAG CGGCGGCGGA 
600
GATACGCCGA AGACGACATC ATCTCAGATC TTCAACGAGG ATACTCTCGA 
650
CCAATTTCTT GAACTTATGG GGAGATCTTG TAAAGAAGAG CTAAATCTTG 
700
ACCCTTTCAT GAAACTCCCA AACCTCGAAA GCCCTAACAG TCAGGCAATC 
750
AACAACTGCC ACGTAAGCTC TCCCGACACT AATCATAATA TCCACGTCAG 
800
CAACGTGGTC GACACTAGCT TTGTTACTAG CTGGGCGGCT TTAGACCGCC 
850
TCGTGGCCTC GCAGCTTAAC GGACCCACAT CATATTCAAT TACAGCCGTC 
900
AATGAGAGCC ACGTGGGCCA TGATCATCTC GCTTTGCCTT CCGTCCGATC 
950
TCCGTACCCC AGCCTAAACC GGTCCGCTTC GTACCACGCC GGTTTAACAC 
1000
AGGAATATAC ACCGGAGATG GAGCTATGGA ATACGACGAC GTCGTCTCTA 
1050
TCGTCATCGC CTGGCCCATT TTGTCACGTG TCGAATGGTA GTGGATAA
1100

>AT2G46770.1 longest ORF length:365
MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD 
50
VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW 
100
KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS 
150
PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG 
200
DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI 
250
NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV 
300
NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL 
350
SSSPGPFCHV SNGSG
400