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| Locus | Common name | Short description |
| AT2G46830 | AtCCA1, CCA1 | circadian clock associated 1 (.1.2) |
>AT2G46830.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, KpnI, NdeI, NheI, NotI, PacI, SalI, SmaI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 24 |
| EcoRV | GAT|ATC | 1568 |
| HindIII | A|AGCTT | 110, 1814 |
| HpaI | GTT|AAC | 1605 |
| NcoI | C|CATGG | 926, 1441, 1724 |
| PstI | CTGCA|G | 454 |
| PvuII | CAG|CTG | 947 |
| SacI | GAGCT|C | 708 |
| SpeI | A|CTAGT | 1018 |
| StyI | C|C[AT][AT]GG | 209, 378, 926, 1441, 1724 |
Click here to view TAIR data
>AT2G46830.1 length:1827
ATGGAGACAA ATTCGTCTGG AGAAGATCTG GTTATTAAGA CTCGGAAGCC | 50 |
ATATACGATA ACAAAGCAAC GTGAAAGGTG GACTGAGGAA GAACATAATA | 100 |
GATTCATTGA AGCTTTGAGG CTTTATGGTA GAGCATGGCA GAAGATTGAA | 150 |
GAACATGTAG CAACAAAAAC TGCTGTCCAG ATAAGAAGTC ACGCTCAGAA | 200 |
ATTTTTCTCC AAGGTAGAGA AAGAGGCTGA AGCTAAAGGT GTAGCTATGG | 250 |
GTCAAGCGCT AGACATAGCT ATTCCTCCTC CACGGCCTAA GCGTAAACCA | 300 |
AACAATCCTT ATCCTCGAAA GACGGGAAGT GGAACGATCC TTATGTCAAA | 350 |
AACGGGTGTG AATGATGGAA AAGAGTCCCT TGGATCAGAA AAAGTGTCGC | 400 |
ATCCTGAGAT GGCCAATGAA GATCGACAAC AATCAAAGCC TGAAGAGAAA | 450 |
ACTCTGCAGG AAGACAACTG TTCAGATTGT TTCACTCATC AGTATCTCTC | 500 |
TGCTGCATCC TCCATGAATA AAAGTTGTAT AGAGACATCA AACGCAAGCA | 550 |
CTTTCCGCGA GTTCTTGCCT TCACGGGAAG AGGGAAGTCA GAATAACAGG | 600 |
GTAAGAAAGG AGTCAAACTC AGATTTGAAT GCAAAATCTC TGGAAAACGG | 650 |
TAATGAGCAA GGACCTCAGA CTTATCCGAT GCATATCCCT GTGCTAGTGC | 700 |
CATTGGGGAG CTCAATAACA AGTTCTCTAT CACATCCTCC TTCAGAGCCA | 750 |
GATAGTCATC CCCACACAGT TGCAGGAGAT TATCAGTCGT TTCCTAATCA | 800 |
TATAATGTCA ACCCTTTTAC AAACACCGGC TCTTTATACT GCCGCAACTT | 850 |
TCGCCTCATC ATTTTGGCCT CCCGATTCTA GTGGTGGCTC ACCTGTTCCA | 900 |
GGGAACTCAC CTCCGAATCT GGCTGCCATG GCCGCAGCCA CTGTTGCAGC | 950 |
TGCTAGTGCT TGGTGGGCTG CCAATGGATT ATTACCTTTA TGTGCTCCTC | 1000 |
TTAGTTCAGG TGGTTTCACT AGTCATCCTC CATCTACTTT TGGACCATCA | 1050 |
TGTGATGTAG AGTACACAAA AGCAAGCACT TTACAACATG GTTCTGTGCA | 1100 |
GAGCCGAGAG CAAGAACACT CCGAGGCATC AAAGGCTCGA TCTTCACTGG | 1150 |
ACTCAGAGGA TGTTGAAAAT AAGAGTAAAC CAGTTTGTCA TGAGCAGCCT | 1200 |
TCTGCAACAC CTGAGAGTGA TGCAAAGGGT TCAGATGGAG CAGGAGACAG | 1250 |
AAAACAAGTT GACCGGTCCT CGTGTGGCTC AAACACTCCG TCGAGTAGTG | 1300 |
ATGATGTTGA GGCGGATGCA TCAGAAAGGC AAGAGGATGG CACCAATGGT | 1350 |
GAGGTGAAAG AAACGAATGA AGACACTAAT AAACCTCAAA CTTCAGAGTC | 1400 |
CAATGCACGC CGCAGTAGAA TCAGCTCCAA TATAACCGAT CCATGGAAGT | 1450 |
CTGTGTCTGA CGAGGGTCGA ATTGCCTTCC AAGCTCTCTT CTCCAGAGAG | 1500 |
GTATTGCCGC AAAGTTTTAC ATATCGAGAA GAACACAGAG AGGAAGAACA | 1550 |
ACAACAACAA GAACAAAGAT ATCCAATGGC ACTTGATCTT AACTTCACAG | 1600 |
CTCAGTTAAC ACCAGTTGAT GATCAAGAGG AGAAGAGAAA CACAGGATTT | 1650 |
CTTGGAATCG GATTAGATGC TTCAAAGCTA ATGAGTAGAG GAAGAACAGG | 1700 |
TTTTAAACCA TACAAAAGAT GTTCCATGGA AGCCAAAGAA AGTAGAATCC | 1750 |
TCAACAACAA TCCTATCATT CATGTGGAAC AGAAAGATCC CAAACGGATG | 1800 |
CGGTTGGAAA CTCAAGCTTC CACATGA | 1850 |
>AT2G46830.1 longest ORF length:608
METNSSGEDL VIKTRKPYTI TKQRERWTEE EHNRFIEALR LYGRAWQKIE | 50 |
EHVATKTAVQ IRSHAQKFFS KVEKEAEAKG VAMGQALDIA IPPPRPKRKP | 100 |
NNPYPRKTGS GTILMSKTGV NDGKESLGSE KVSHPEMANE DRQQSKPEEK | 150 |
TLQEDNCSDC FTHQYLSAAS SMNKSCIETS NASTFREFLP SREEGSQNNR | 200 |
VRKESNSDLN AKSLENGNEQ GPQTYPMHIP VLVPLGSSIT SSLSHPPSEP | 250 |
DSHPHTVAGD YQSFPNHIMS TLLQTPALYT AATFASSFWP PDSSGGSPVP | 300 |
GNSPPNLAAM AAATVAAASA WWAANGLLPL CAPLSSGGFT SHPPSTFGPS | 350 |
CDVEYTKAST LQHGSVQSRE QEHSEASKAR SSLDSEDVEN KSKPVCHEQP | 400 |
SATPESDAKG SDGAGDRKQV DRSSCGSNTP SSSDDVEADA SERQEDGTNG | 450 |
EVKETNEDTN KPQTSESNAR RSRISSNITD PWKSVSDEGR IAFQALFSRE | 500 |
VLPQSFTYRE EHREEEQQQQ EQRYPMALDL NFTAQLTPVD DQEEKRNTGF | 550 |
LGIGLDASKL MSRGRTGFKP YKRCSMEAKE SRILNNNPII HVEQKDPKRM | 600 |
RLETQAST | 650 |