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| Locus | Common name | Short description |
| AT2G46830 | AtCCA1, CCA1 | circadian clock associated 1 (.1.2) |
>AT2G46830.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, KpnI, NdeI, NheI, NotI, PacI, SalI, SmaI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRV | GAT|ATC | 1322 |
| HindIII | A|AGCTT | 1568 |
| HpaI | GTT|AAC | 1359 |
| NcoI | C|CATGG | 680, 1195, 1478 |
| PstI | CTGCA|G | 208 |
| PvuII | CAG|CTG | 701 |
| SacI | GAGCT|C | 462 |
| SpeI | A|CTAGT | 772 |
| StyI | C|C[AT][AT]GG | 132, 680, 1195, 1478 |
Click here to view TAIR data
>AT2G46830.2 length:1581
ATGGGTCAAG CGCTAGACAT AGCTATTCCT CCTCCACGGC CTAAGCGTAA | 50 |
ACCAAACAAT CCTTATCCTC GAAAGACGGG AAGTGGAACG ATCCTTATGT | 100 |
CAAAAACGGG TGTGAATGAT GGAAAAGAGT CCCTTGGATC AGAAAAAGTG | 150 |
TCGCATCCTG AGATGGCCAA TGAAGATCGA CAACAATCAA AGCCTGAAGA | 200 |
GAAAACTCTG CAGGAAGACA ACTGTTCAGA TTGTTTCACT CATCAGTATC | 250 |
TCTCTGCTGC ATCCTCCATG AATAAAAGTT GTATAGAGAC ATCAAACGCA | 300 |
AGCACTTTCC GCGAGTTCTT GCCTTCACGG GAAGAGGGAA GTCAGAATAA | 350 |
CAGGGTAAGA AAGGAGTCAA ACTCAGATTT GAATGCAAAA TCTCTGGAAA | 400 |
ACGGTAATGA GCAAGGACCT CAGACTTATC CGATGCATAT CCCTGTGCTA | 450 |
GTGCCATTGG GGAGCTCAAT AACAAGTTCT CTATCACATC CTCCTTCAGA | 500 |
GCCAGATAGT CATCCCCACA CAGTTGCAGG AGATTATCAG TCGTTTCCTA | 550 |
ATCATATAAT GTCAACCCTT TTACAAACAC CGGCTCTTTA TACTGCCGCA | 600 |
ACTTTCGCCT CATCATTTTG GCCTCCCGAT TCTAGTGGTG GCTCACCTGT | 650 |
TCCAGGGAAC TCACCTCCGA ATCTGGCTGC CATGGCCGCA GCCACTGTTG | 700 |
CAGCTGCTAG TGCTTGGTGG GCTGCCAATG GATTATTACC TTTATGTGCT | 750 |
CCTCTTAGTT CAGGTGGTTT CACTAGTCAT CCTCCATCTA CTTTTGGACC | 800 |
ATCATGTGAT GTAGAGTACA CAAAAGCAAG CACTTTACAA CATGGTTCTG | 850 |
TGCAGAGCCG AGAGCAAGAA CACTCCGAGG CATCAAAGGC TCGATCTTCA | 900 |
CTGGACTCAG AGGATGTTGA AAATAAGAGT AAACCAGTTT GTCATGAGCA | 950 |
GCCTTCTGCA ACACCTGAGA GTGATGCAAA GGGTTCAGAT GGAGCAGGAG | 1000 |
ACAGAAAACA AGTTGACCGG TCCTCGTGTG GCTCAAACAC TCCGTCGAGT | 1050 |
AGTGATGATG TTGAGGCGGA TGCATCAGAA AGGCAAGAGG ATGGCACCAA | 1100 |
TGGTGAGGTG AAAGAAACGA ATGAAGACAC TAATAAACCT CAAACTTCAG | 1150 |
AGTCCAATGC ACGCCGCAGT AGAATCAGCT CCAATATAAC CGATCCATGG | 1200 |
AAGTCTGTGT CTGACGAGGG TCGAATTGCC TTCCAAGCTC TCTTCTCCAG | 1250 |
AGAGGTATTG CCGCAAAGTT TTACATATCG AGAAGAACAC AGAGAGGAAG | 1300 |
AACAACAACA ACAAGAACAA AGATATCCAA TGGCACTTGA TCTTAACTTC | 1350 |
ACAGCTCAGT TAACACCAGT TGATGATCAA GAGGAGAAGA GAAACACAGG | 1400 |
ATTTCTTGGA ATCGGATTAG ATGCTTCAAA GCTAATGAGT AGAGGAAGAA | 1450 |
CAGGTTTTAA ACCATACAAA AGATGTTCCA TGGAAGCCAA AGAAAGTAGA | 1500 |
ATCCTCAACA ACAATCCTAT CATTCATGTG GAACAGAAAG ATCCCAAACG | 1550 |
GATGCGGTTG GAAACTCAAG CTTCCACATG A | 1600 |
>AT2G46830.2 longest ORF length:526
MGQALDIAIP PPRPKRKPNN PYPRKTGSGT ILMSKTGVND GKESLGSEKV | 50 |
SHPEMANEDR QQSKPEEKTL QEDNCSDCFT HQYLSAASSM NKSCIETSNA | 100 |
STFREFLPSR EEGSQNNRVR KESNSDLNAK SLENGNEQGP QTYPMHIPVL | 150 |
VPLGSSITSS LSHPPSEPDS HPHTVAGDYQ SFPNHIMSTL LQTPALYTAA | 200 |
TFASSFWPPD SSGGSPVPGN SPPNLAAMAA ATVAAASAWW AANGLLPLCA | 250 |
PLSSGGFTSH PPSTFGPSCD VEYTKASTLQ HGSVQSREQE HSEASKARSS | 300 |
LDSEDVENKS KPVCHEQPSA TPESDAKGSD GAGDRKQVDR SSCGSNTPSS | 350 |
SDDVEADASE RQEDGTNGEV KETNEDTNKP QTSESNARRS RISSNITDPW | 400 |
KSVSDEGRIA FQALFSREVL PQSFTYREEH REEEQQQQEQ RYPMALDLNF | 450 |
TAQLTPVDDQ EEKRNTGFLG IGLDASKLMS RGRTGFKPYK RCSMEAKESR | 500 |
ILNNNPIIHV EQKDPKRMRL ETQAST | 550 |