|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT2G46870 | NGA1 | NGATHA1, AP2/B3-like transcriptional factor family protein (.1) |
>AT2G46870.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 231 |
| HindIII | A|AGCTT | 331 |
| PvuII | CAG|CTG | 850 |
| StyI | C|C[AT][AT]GG | 466 |
Click here to view TAIR data
>AT2G46870.1 length:933
ATGATGACAG ATTTATCTCT CACGAGAGAT GAAGATGAAG AAGAAGCAAA | 50 |
GCCCTTAGCA GAAGAAGAAG GAGCGCGTGA AGTAGCAGAC AGAGAGCACA | 100 |
TGTTCGACAA AGTTGTGACT CCAAGTGATG TCGGAAAACT AAACCGACTT | 150 |
GTGATCCCAA AGCAACACGC AGAGAGATTC TTCCCTTTAG ATTCATCTTC | 200 |
AAACGAGAAA GGTTTGCTTT TAAACTTCGA AGATCTCACT GGCAAATCTT | 250 |
GGAGGTTCCG TTACTCTTAC TGGAACAGTA GTCAAAGCTA TGTCATGACT | 300 |
AAAGGTTGGA GCAGATTCGT TAAAGACAAA AAGCTTGACG CCGGAGATAT | 350 |
TGTCTCTTTC CAAAGATGTG TCGGAGATTC AGGAAGAGAT AGCCGTTTGT | 400 |
TTATTGATTG GAGGAGAAGA CCTAAAGTCC CTGACCATCC TCATTTCGCC | 450 |
GCCGGAGCTA TGTTCCCTAG GTTTTACAGC TTTCCTTCGA CCAATTACAG | 500 |
TCTTTATAAT CATCAGCAGC AACGTCATCA TCACAGTGGT GGTGGTTATA | 550 |
ATTATCATCA AATTCCGAGA GAATTTGGTT ATGGTTACTT CGTTAGGTCA | 600 |
GTGGATCAGA GGAACAATCC TGCGGCTGCG GTGGCTGATC CGTTGGTGAT | 650 |
TGAATCTGTG CCGGTGATGA TGCACGGGAG AGCTAATCAG GAACTTGTTG | 700 |
GAACGGCCGG GAAGAGACTG AGGCTTTTTG GAGTTGATAT GGAATGCGGC | 750 |
GAGAGCGGAA TGACCAACAG TACGGAGGAG GAATCATCAT CTTCCGGTGG | 800 |
AAGTTTGCCA CGTGGAGGCG GTGGTGGTGC TTCATCTTCC TCTTTCTTTC | 850 |
AGCTGAGACT TGGAAGCAGC AGTGAAGATG ATCACTTCAC TAAGAAAGGA | 900 |
AAGTCTTCAT TGTCTTTTGA TTTGGATCAA TAA | 950 |
>AT2G46870.1 longest ORF length:310
MMTDLSLTRD EDEEEAKPLA EEEGAREVAD REHMFDKVVT PSDVGKLNRL | 50 |
VIPKQHAERF FPLDSSSNEK GLLLNFEDLT GKSWRFRYSY WNSSQSYVMT | 100 |
KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA | 150 |
AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS | 200 |
VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG | 250 |
ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG | 300 |
KSSLSFDLDQ | 350 |