fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46970 PIL1, bHLH124 phytochrome interacting factor 3-like 1 (.1)

>AT2G46970.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 537
EcoRI G|AATTC 730
HindIII A|AGCTT 1035
NcoI C|CATGG 914
NdeI CA|TATG 931
PstI CTGCA|G 467
PvuII CAG|CTG 470
StyI C|C[AT][AT]GG 914
XhoI C|TCGAG 521


Click here to view TAIR data

>AT2G46970.1 length:1251
ATGGAAGCAA AACCCTTAGC ATCATCATCA TCTGAACCAA ACATGATTTC 
50
TCCATCATCA AACATTAAAC CAAAATTAAA AGATGAAGAT TATATGGAGC 
100
TGGTGTGTGA AAATGGGCAG ATTCTTGCAA AGATTCGAAG ACCAAAGAAC 
150
AACGGTTCTT TTCAAAAGCA ACGTAGGCAA TCTCTCCTGG ATTTGTATGA 
200
GACCGAGTAC AGCGAGGGTT TCAAGAAAAA CATCAAGATT CTTGGAGACA 
250
CACAAGTTGT TCCGGTGAGT CAGTCTAAGC CACAACAAGA TAAAGAAACC 
300
AATGAACAAA TGAACAACAA TAAGAAGAAG CTAAAGTCCT CCAAAATCGA 
350
ATTTGAGAGA AATGTTTCGA AAAGCAACAA ATGTGTTGAA TCATCAACAT 
400
TAATTGATGT TTCTGCTAAA GGTCCAAAGA ATGTTGAAGT TACTACAGCT 
450
CCTCCTGATG AGCAATCTGC AGCTGTTGGT AGATCCACGG AATTGTATTT 
500
TGCTTCTTCA TCGAAGTTTT CTCGAGGAAC TTCGAGAGAT CTAAGTTGTT 
550
GTTCTTTAAA GAGGAAGTAT GGAGATATTG AAGAAGAAGA ATCAACCTAT 
600
TTAAGTAATA ATTCAGATGA TGAATCAGAT GATGCGAAGA CACAAGTTCA 
650
TGCGAGAACA AGAAAGCCGG TGACTAAAAG AAAACGAAGC ACAGAAGTCC 
700
ATAAGTTATA TGAAAGAAAA CGAAGAGATG AATTCAACAA GAAAATGCGT 
750
GCTTTGCAGG ACCTACTACC AAATTGTTAC AAGGATGATA AGGCTTCATT 
800
GTTGGATGAG GCTATCAAAT ATATGCGGAC CCTTCAACTT CAAGTTCAGA 
850
TGATGAGTAT GGGAAATGGA TTAATAAGAC CACCTACGAT GTTGCCAATG 
900
GGTCATTACT CTCCCATGGG TCTAGGAATG CATATGGGTG CAGCAGCAAC 
950
ACCAACATCA ATACCGCAAT TCCTGCCTAT GAATGTTCAA GCAACCGGTT 
1000
TTCCGGGGAT GAACAATGCA CCACCACAAA TGCTAAGCTT TCTTAATCAC 
1050
CCAAGTGGAC TAATTCCAAA CACTCCTATC TTTTCTCCAT TGGAAAATTG 
1100
CTCTCAGCCA TTCGTGGTGC CTTCGTGTGT TTCTCAGACT CAGGCTACTT 
1150
CTTTTACTCA ATTCCCAAAG TCTGCGTCCG CCTCAAACTT AGAAGATGCA 
1200
ATGCAATATA GAGGAAGCAA CGGTTTTAGT TATTATCGCT CGCCAAACTA 
1250
A
1300

>AT2G46970.1 longest ORF length:416
MEAKPLASSS SEPNMISPSS NIKPKLKDED YMELVCENGQ ILAKIRRPKN 
50
NGSFQKQRRQ SLLDLYETEY SEGFKKNIKI LGDTQVVPVS QSKPQQDKET 
100
NEQMNNNKKK LKSSKIEFER NVSKSNKCVE SSTLIDVSAK GPKNVEVTTA 
150
PPDEQSAAVG RSTELYFASS SKFSRGTSRD LSCCSLKRKY GDIEEEESTY 
200
LSNNSDDESD DAKTQVHART RKPVTKRKRS TEVHKLYERK RRDEFNKKMR 
250
ALQDLLPNCY KDDKASLLDE AIKYMRTLQL QVQMMSMGNG LIRPPTMLPM 
300
GHYSPMGLGM HMGAAATPTS IPQFLPMNVQ ATGFPGMNNA PPQMLSFLNH 
350
PSGLIPNTPI FSPLENCSQP FVVPSCVSQT QATSFTQFPK SASASNLEDA 
400
MQYRGSNGFS YYRSPN
450