fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G46990 IAA20 indole-3-acetic acid inducible 20 (.1)

>AT2G46990.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
StyI C|C[AT][AT]GG 463


Click here to view TAIR data

>AT2G46990.1 length:528
ATGGGAAGAG GGAGAAGTTC ATCGTCTTCT TCAATAGAGA GTAGCAGCAA 
50
GAGCAACCCA TTCGGTGCTT CGTCAAGTAC TCGAAACCTA AGCACGGACC 
100
TGAGACTCGG ACTCAGCTTC GGGACATCCT CAGGGACTCA ATATTTCAAC 
150
GGTGGCTATG GGTACTCCGT TGCAGCTCCG GCGGTAGAGG ATGCGGAATA 
200
TGTGGCGGCT GTGGAGGAGG AAGAAGAGAA TGAGTGTAAC AGTGTAGGGA 
250
GCTTTTACGT GAAAGTGAAC ATGGAAGGAG TTCCAATTGG AAGAAAGATC 
300
GATCTAATGT CTCTTAATGG CTACCGCGAC TTGATCAGAA CCCTTGATTT 
350
CATGTTCAAC GCATCCATTC TCTGGGCTGA AGAAGAAGAC ATGTGCAATG 
400
AGAAGAGTCA CGTGCTAACG TACGCAGATA AGGAAGGTGA CTGGATGATG 
450
GTTGGAGATG TTCCTTGGGA GATGTTCTTG TCTACTGTGA GAAGACTGAA 
500
GATTTCAAGA GCTAATTACC ACTACTGA
550

>AT2G46990.1 longest ORF length:175
MGRGRSSSSS SIESSSKSNP FGASSSTRNL STDLRLGLSF GTSSGTQYFN 
50
GGYGYSVAAP AVEDAEYVAA VEEEEENECN SVGSFYVKVN MEGVPIGRKI 
100
DLMSLNGYRD LIRTLDFMFN ASILWAEEED MCNEKSHVLT YADKEGDWMM 
150
VGDVPWEMFL STVRRLKISR ANYHY
200