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| Locus | Common name | Short description |
| AT2G47090 | zinc ion binding;nucleic acid binding (.1.2) |
>AT2G47090.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 244 |
| BglII | A|GATCT | 2169 |
| EcoRI | G|AATTC | 1191, 2061, 2178 |
| HindIII | A|AGCTT | 1274 |
| NcoI | C|CATGG | 843 |
| NdeI | CA|TATG | 445, 646 |
| PstI | CTGCA|G | 1403, 2159 |
| PvuII | CAG|CTG | 514 |
| StyI | C|C[AT][AT]GG | 843, 1086, 1167, 1692, 1937 |
| XbaI | T|CTAGA | 652 |
Click here to view TAIR data
>AT2G47090.1 length:2301
ATGGATGATA GTTGCGCCGT TTGCGCGGAG AATCTCGAAT GGGTTGGTTA | 50 |
CGGATCTTGT GGTCACAGAG AGGTTTGCTC TACTTGCGTT GTTCGTCTTC | 100 |
GTTTCATACT CAATGATCGT CGATGCTGTA TCTGCAAAAC CGAATGCCCC | 150 |
GTCGTCTTTG TCACAAAGGC TTTGGGTGAT TATACAAAGA CGATTAGTGA | 200 |
TTTCTCGACT ACTTTCCCAT CAGTACCAAA GGAAGGTCGA GTAGGATCCT | 250 |
TCTGGTATCA TGAAGAAACC AATGTTTACT TTGATGACTT GAACCATTAC | 300 |
ACAAGGATTA AAGCAATGTG CAGGCTCTCT TGCAATTTGT GTAACGATAC | 350 |
AAACAAGACT CGACCAAAGA AAGAGCCTAA CCATTGTGTT CGGTTTAAGA | 400 |
GCGTTGAACA CTTGAAAGAT CATTTAAATC ATCAGCACAA ATTGCATATG | 450 |
TGCAGTTTAT GTCTTGTAGG TCGTAAGGTT TTCATTTGTG AACAAAAGTT | 500 |
GTTTACTAAG GGACAGCTGA ACCAACATAT AAGTAGTGGT GACTCGGAAG | 550 |
TTGATGGAAG TGAGAGTGAA AGAGGAGGTT TCACTGGTCA TCCTATGTGT | 600 |
GAGTTCTGTA AAAGACCATT CTATGGTGAT AATGAGCTAT ACACTCATAT | 650 |
GTCTAGAGAG CACTACACTT GTCATATATG CCAAAGGCTG AAGCCTGGAC | 700 |
AATATGAATA TTATGGAAAC TATGATGATC TTGAGGTTCA TTTCCGAAGT | 750 |
GACCATTTCC TATGTGAAGA CGAAACCTGC CTTGCTAAGA AGTTCATAGT | 800 |
TTTCCAAATC GAAGCTGAGC TAAAAAGGCA TAATGCTATT GACCATGGAG | 850 |
GTAGAATGTC TCGGTCTCAA CAAAATGCAT CACTACAGAT ACAAGCCAGT | 900 |
TTCCAATACC CGAACAGTCG CCGTGGAAGA CGCCGATCTT CTCTTCGTGA | 950 |
GCCTAATCTT GTGCTTCTGG AATCTCAAGC ATCTTATGCC TTTAACGACG | 1000 |
ATAATAATCT TCCTCAACAT GTGGGACGCT CTGGAAATTC ACGTCTTGGA | 1050 |
GAATCTTCTT TTCCTCCACT CTCTGTGCAA GCAAACCAAG GCCAATCAAG | 1100 |
ATTTGGACAG AACTCAGAGA GTTTAGTTAG TAACACCACG ACTACTCGTC | 1150 |
AAAGACATCG TGCAAACCAA GGCCAATCAA GATTTGGACA GAATTCAGAG | 1200 |
AGTTTAGTTA GTAACACCAC GACTACTCGT CAAAGACATC AAACAAATAG | 1250 |
AAGTGCAACT TCTGGTTCTT CTCAAGCTTG GCCAGCACTA AACCGAGGCC | 1300 |
CGGCAGAAAT ATCAATTACA AGCAGGGTAC AATCTTCTGG TGCTTCTGCT | 1350 |
CAATCTCAAT CTAGGCACCA TGACAGAGTT GAAAGTACTA GAACTCTTGC | 1400 |
TTCTGCAGTT CCACAAGATG CTCGTACCAC AGTTGGTGGA TGCTCATCTG | 1450 |
GTTCTTCTCT GAGTTCCGCC AATGCAACAA AGAGGAATAA TCATCACTCG | 1500 |
TCTTCAACCC CTAAAATGTC TGAAACAAGA TCACTGGCGC AGCCTTCTCA | 1550 |
TTCTGATTCT CCTCAAATTT CCGCTGTGAA AAATCGCAGG TCATCATCCA | 1600 |
CCAGTGCAAA TGCAGGGAAC ATTCAAGTAG CGCAAGGTGT TTCTGATGTA | 1650 |
CAGTCTGACA ATAAAAGTTT GGTTGAAAAA ATACATGCCA GCCTTGGACA | 1700 |
CGATGAAGAG TTATTCATGG CCTTCAAGAA TACATCAGGA AAGTATCGTC | 1750 |
ATGGTTCCAT CGATGCCAGA ACTTACTTGG AATATGTGAA AGGTTATGGT | 1800 |
TTGTCTCACT TAGTTCTGGA TATGGCTAGA CTCTGCCCGG ACCCTCAGAG | 1850 |
GCAGAAGGAA CTCATTGATA CCCACAACGC CTGCTTGAAA GGAGGAAATA | 1900 |
AAGGGAAAGC TGTGAAGGTT GAAAGTAGCA GTGACTCCAA GGGGGATAGA | 1950 |
TTTGTTGATA CAGTGAGGAA GTTACAATTC TCTGACAAAT CTCAGGACAA | 2000 |
AGACAAAGAT AAGGATGCAT ACCGTTCAGA TAAAGGCAAA ACAAAAGTGA | 2050 |
CGACGTTGGT GAATTCTTCA TCGGCTGGAG TGGGATTAGG TGACACAGGC | 2100 |
AAGCAACCTA AGAAAACTTC AAAGTTTCTC AGAACACGTC TAGGAGAGAA | 2150 |
ATCAATGGCT GCAGTACTAG ATCTTAGGAA TTCTAACCCA GAGCCTGAAC | 2200 |
CAGAACCTAA GAACGATAAC TCCAAAAGGA GCCAGAACTC TCCCGGTGGA | 2250 |
TTGCCACTTC GTGGTGCTTG GAAGAGAGGA AGTGCAAAAC TCTTCGTCTA | 2300 |
G | 2350 |
>AT2G47090.1 longest ORF length:766
MDDSCAVCAE NLEWVGYGSC GHREVCSTCV VRLRFILNDR RCCICKTECP | 50 |
VVFVTKALGD YTKTISDFST TFPSVPKEGR VGSFWYHEET NVYFDDLNHY | 100 |
TRIKAMCRLS CNLCNDTNKT RPKKEPNHCV RFKSVEHLKD HLNHQHKLHM | 150 |
CSLCLVGRKV FICEQKLFTK GQLNQHISSG DSEVDGSESE RGGFTGHPMC | 200 |
EFCKRPFYGD NELYTHMSRE HYTCHICQRL KPGQYEYYGN YDDLEVHFRS | 250 |
DHFLCEDETC LAKKFIVFQI EAELKRHNAI DHGGRMSRSQ QNASLQIQAS | 300 |
FQYPNSRRGR RRSSLREPNL VLLESQASYA FNDDNNLPQH VGRSGNSRLG | 350 |
ESSFPPLSVQ ANQGQSRFGQ NSESLVSNTT TTRQRHRANQ GQSRFGQNSE | 400 |
SLVSNTTTTR QRHQTNRSAT SGSSQAWPAL NRGPAEISIT SRVQSSGASA | 450 |
QSQSRHHDRV ESTRTLASAV PQDARTTVGG CSSGSSLSSA NATKRNNHHS | 500 |
SSTPKMSETR SLAQPSHSDS PQISAVKNRR SSSTSANAGN IQVAQGVSDV | 550 |
QSDNKSLVEK IHASLGHDEE LFMAFKNTSG KYRHGSIDAR TYLEYVKGYG | 600 |
LSHLVLDMAR LCPDPQRQKE LIDTHNACLK GGNKGKAVKV ESSSDSKGDR | 650 |
FVDTVRKLQF SDKSQDKDKD KDAYRSDKGK TKVTTLVNSS SAGVGLGDTG | 700 |
KQPKKTSKFL RTRLGEKSMA AVLDLRNSNP EPEPEPKNDN SKRSQNSPGG | 750 |
LPLRGAWKRG SAKLFV | 800 |