fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G47210 myb-like transcription factor family protein (.1)

>AT2G47210.1 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
ApaI GGGCC|C 521
BglII A|GATCT 1002
EcoRI G|AATTC 418
NcoI C|CATGG 629
NdeI CA|TATG 587
PstI CTGCA|G 188
PvuII CAG|CTG 1105
SacI GAGCT|C 539
StyI C|C[AT][AT]GG 392, 629


Click here to view TAIR data

>AT2G47210.1 length:1326
ATGGGCGGTA CGGACGCGAA GGACATTCTC GGGTTGCCGA AGACTCCACT 
50
GTCTTTAACT CAGGAGAAGA AATCTCGACC CCAGAAAGAG TCCCATAGAA 
100
AACCCGATGG CATTTCTCGC GAGGTTTATG CGCTTACCGG GGGCGTTGCA 
150
CCTCTTATGC CTTCAATTGA TTTAAAGCGC CGTCCTCCTG CAGATGAGAA 
200
GGTTGCTTGG AAATGGCTTT CCTTCACAAA TTCTGCTAGG AAAGATGATT 
250
TGCAGCTTTA CCATTGGGTT AGAGTGGTTA ATGATGTTCC ACCAACAGGT 
300
GACTATTCCT TTGCCAAATA TAACAAGTCA GTTGATATTT TGAAATACAC 
350
AGACGAGGAG TATGAGAATC ATTTAACGGA TTCTGTGTGG ACCAAGGAAG 
400
AGACAGATCA GTTGTTTGAA TTCTGTCAAA ATTTTGATCT CCGCTTTGTT 
450
GTAATAGCTG ATCGATTTCC AGTATCACGG ACTGTGGAGG AATTGAAGGA 
500
TCGTTACTAC AGTGTAAACC GGGCCCTGCT GCGTGCTAGA GCTCAGTCTC 
550
CAGCAGATGT TGCAAACCAT CCTCTCATGA AGGAACCATA TGATATTACA 
600
CGCGATAGAG AGCGCAAGCG GGCATTGTCC ATGGTCCTAT CCCAGAGTAG 
650
ACATCAGGAG AAGAAAGATG CTGAGATACT TGCTGAGGCT AAAAGAATCA 
700
CAGAGATGCG ATTGGCCGCA CGTCGTGCAG AAGAACCTGA TGTGTCTGCG 
750
AATGAGAACG CCGGTCTTGA TAAAGCTGAT GGGGTTGTTC CAGGGCGTAG 
800
TGTATCTCCA ACATCCAATT CTCAACTTCC TGCTACTGCT GTGGCTCCAT 
850
CAACACTAAC TATGGCAGAT TATGCCTCTA CCCTTGCTTC TCTGCGCATG 
900
CTTCATGTAT ACTTGAGAAC CTATGGACTT GAACAAATGG TCCAAGCTGC 
950
AAGCTCTGCT GTTGGTCTTC GAACGATCAA GCGGGTTGAG CAGACTCTGC 
1000
AAGATCTCGG GGTTAATTTA AAGCCAAAGG TTCCTACCAA AACTGTATGC 
1050
GATGAGCATC TTGAGCTAAG AAAAGAAATA TTAACACTAC TGAATCTTCA 
1100
GAAGCAGCTG CAATATAAGG AATCAGAAGG TTCATCACAT CGTGAAGGGT 
1150
CGTATGCCGC AATGCCAGAC ACTCCAAAGG ATCGTGTTTT CGCACCGGAC 
1200
CCATTCAGTT TTGGAGCTGA AAGACCAATC AAGAAGGAAC AAAAACGCAA 
1250
GGGTCCTGGA AGACAAGCAG ATACTCCTTC ACCAGCTCAT AAGCGTCCGA 
1300
GAAAGTTGAA AGCCTCTGAT CTCTAA
1350

>AT2G47210.1 longest ORF length:441
MGGTDAKDIL GLPKTPLSLT QEKKSRPQKE SHRKPDGISR EVYALTGGVA 
50
PLMPSIDLKR RPPADEKVAW KWLSFTNSAR KDDLQLYHWV RVVNDVPPTG 
100
DYSFAKYNKS VDILKYTDEE YENHLTDSVW TKEETDQLFE FCQNFDLRFV 
150
VIADRFPVSR TVEELKDRYY SVNRALLRAR AQSPADVANH PLMKEPYDIT 
200
RDRERKRALS MVLSQSRHQE KKDAEILAEA KRITEMRLAA RRAEEPDVSA 
250
NENAGLDKAD GVVPGRSVSP TSNSQLPATA VAPSTLTMAD YASTLASLRM 
300
LHVYLRTYGL EQMVQAASSA VGLRTIKRVE QTLQDLGVNL KPKVPTKTVC 
350
DEHLELRKEI LTLLNLQKQL QYKESEGSSH REGSYAAMPD TPKDRVFAPD 
400
PFSFGAERPI KKEQKRKGPG RQADTPSPAH KRPRKLKASD L
450