fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G47270 bHLH151, UPB1 UPBEAT1, sequence-specific DNA binding transcription factors;transcription regulators (.1)

>AT2G47270.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 116
StyI C|C[AT][AT]GG 100
XbaI T|CTAGA 121


Click here to view TAIR data

>AT2G47270.1 length:309
ATGGGTGTAA CATTAGAAGG ACAAAGAAAG GAATCAATTT GGGTTTTGAT 
50
GAGAAGACAA AGGGCTCGAA GGGCACTTGT GAAGAAGATC ATGATCCGAC 
100
CAAGGAAGAG TGTAGAAGCT TCTAGAAGAC CTTGTCGCGC AATACACAGA 
150
CGAGTGAAGA CGCTAAAAGA GCTTGTTCCC AACACCAAAA CATCAGAAGG 
200
TTTAGATGGA CTCTTTAGAC AAACGGCAGA TTATATCTTG GCTTTGGAAA 
250
TGAAAGTGAA AGTTATGCAG ACAATGGTTC AGGTTTTGAC CGAAACTAAC 
300
TGTGTTTAA
350

>AT2G47270.1 longest ORF length:102
MGVTLEGQRK ESIWVLMRRQ RARRALVKKI MIRPRKSVEA SRRPCRAIHR 
50
RVKTLKELVP NTKTSEGLDG LFRQTADYIL ALEMKVKVMQ TMVQVLTETN 
100
CV
150