Locus |
Common name |
Short description |
AT2G47520 |
AtERF71, ERF71, HRE2 |
HYPOXIA RESPONSIVE ERF \(ETHYLENE RESPONSE FACTOR\) 2, Arabidopsis thaliana ethylene response factor 71, Integrase-type DNA-binding superfamily protein (.1) |
>AT2G47520.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
169 |
StyI
| C|C[AT][AT]GG |
169 |
XhoI
| C|TCGAG |
257 |
Click here to view TAIR data
>AT2G47520.1 length:516
ATGTGTGGGG GAGCTATCAT TTCTGATTTC ATCTGGTCGA AATCTGAGTC | 50 |
AGAACCGAGT CAACTCGGCT CTGTTAGCAG CAGGAAGAAG CGTAAACCCG | 100 |
TCTCAGTGAG TGAAGAAAGA GATGGGAAAC GAGAGAGGAA GAATCTGTAC | 150 |
AGAGGGATAA GGCAGAGGCC ATGGGGCAAA TGGGCAGCGG AGATTCGTGA | 200 |
CCCGAGCAAA GGTGTACGTG TCTGGCTTGG CACATTCAAA ACCGCCGACG | 250 |
AAGCTGCTCG AGCCTACGAC GTTGCTGCCA TCAAAATCCG TGGCCGGAAA | 300 |
GCCAAACTGA ATTTCCCAAA CACTCAAGTA GAAGAAGAAG CCGATACTAA | 350 |
ACCAGGGGGG AATCAAAATG AGCTGATTTC GGAAAACCAA GTAGAGAGCT | 400 |
TATCGGAGGA CCTGATGGCA TTGGAGGATT ACATGAGATT CTATCAGATT | 450 |
CCGGTTGCCG ACGACCAATC GGCGACCGAT ATTGGAAATT TATGGAGCTA | 500 |
TCAAGACTCC AATTAA | 550 |
>AT2G47520.1 longest ORF length:171
MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY | 50 |
RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK | 100 |
AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI | 150 |
PVADDQSATD IGNLWSYQDS N | 200 |
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