fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G47810 NF-YB5 "nuclear factor Y, subunit B5", nuclear factor Y, subunit B5 (.1)

>AT2G47810.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 340


Click here to view TAIR data

>AT2G47810.1 length:483
ATGGCGGGGA ATTATCATTC GTTCCAAAAT CCAATCCCTC GATACCAGAA 
50
TTACAACTTC GGGAGCAGCT CATCTAATCA TCAACATGAA CATGATGGGT 
100
TAGTGGTGGT GGTGGAGGAT CAACAGCAAG AAGAAAGCAT GATGGTAAAA 
150
GAACAAGACA GGCTACTTCC GATAGCAAAC GTAGGAAGGA TCATGAAGAA 
200
CATCCTCCCA GCAAACGCAA AGGTCTCTAA AGAAGCCAAA GAGACTATGC 
250
AAGAATGTGT GTCCGAGTTC ATTAGCTTCG TCACGGGAGA AGCATCCGAT 
300
AAATGCCACA AGGAGAAGCG AAAGACCGTT AATGGAGACG ATATCTGTTG 
350
GGCTATGGCT AATCTAGGGT TTGATGATTA CGCCGCCCAG CTCAAGAAGT 
400
ACTTACATCG TTACCGAGTT CTCGAAGGTG AGAAACCTAA TCATCACGGC 
450
AAAGGAGGAC CTAAATCCTC GCCAGATAAT TAA
500

>AT2G47810.1 longest ORF length:160
MAGNYHSFQN PIPRYQNYNF GSSSSNHQHE HDGLVVVVED QQQEESMMVK 
50
EQDRLLPIAN VGRIMKNILP ANAKVSKEAK ETMQECVSEF ISFVTGEASD 
100
KCHKEKRKTV NGDDICWAMA NLGFDDYAAQ LKKYLHRYRV LEGEKPNHHG 
150
KGGPKSSPDN 
200