fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G01030 C2H2 and C2HC zinc fingers superfamily protein (.1)

>AT3G01030.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 37
SacI GAGCT|C 127
XhoI C|TCGAG 65


Click here to view TAIR data

>AT3G01030.1 length:1116
ATGGAAGAAC AACAAGAATT TGAGAAACCC ATCTTCGAAT TCCGTCCTAA 
50
GAAGCTCAGA ACCTCTCGAG TTTCGAGAAA TCTCATGAAG AAGACTGGCT 
100
TCAGAGAATC TATGAATCAT TACGAAGAGC TCTCTTGCAA CTACGGATTG 
150
AGGGAAAACC CGAAGAAAAC CCAGAAATCT TTACTCGATC ATCGATTCTG 
200
TACGAGGAGG AGGAGAAATA AAAAGATCCT GATTCGATGC AAAGAATGCG 
250
GGAAAGGGTT TCTTTACGAG AAATGTCTGT TTAATCATCT CCAAGTGACG 
300
CATTCTGAAG AATCTACAAG AAGAAGCCTG TTTTGTAGGT TTAGTATTGT 
350
GCAGAGGAGA AAAAGATCGA AGAGAGTTTC CAGGTACAAG AAGATTCTTC 
400
CTCGATTCTC TGTTTCTTCT TCTTCGTGTA CTATGTTTCC TGTTTCTGTG 
450
GATGATGGAG GATTATTAGA AGTCGCTGAG TCTCTGATTC TCTTGTCCAT 
500
GAGTGGTGGA AAGTTCGTGA ATGGTTTGGA ACATTTTGGT AAAGCTCTGG 
550
GTTCGACTCA GAGAAAATTT GAAGACGGGT TATTGAGAAA TGAGCAGAGA 
600
CTTGTTGGTG AAGCTCTGGA TTCGAATCCA GAGGTGAATT TGAGAAAAGA 
650
TGGAGACTTT GAATATGGGC TTTTGAGTAA TGAGCAGAAG AAACTTGTGG 
700
GGATAAGCAG AGCATCTGTT GGAACATCGA AAGAGCTTTC GGGTTACTTG 
750
GCAAACAAGA AGGGCAGAGA AGATGATGAA TTGGGTCAGC AGAAACAGGC 
800
TGGAGCAAGA ATACTTAGAG AAGAAACTGA TAACGAACAG AAACTTGTTC 
850
GTCAAGAAAC TGCATTTGAA GATTCAGTAT CAGGATTTGA GATGAATATA 
900
GAGCATCGGT GTGGGCTCTG TCACAAGGTT TTCTCGACTT ATCAAACTCT 
950
TGGTGGTCAT CAGACGTTCC ATAGAATGAG AAACAAATCC AAAAGTCAAA 
1000
CCAAGAGATG CAGAGAAGAA TCGATAGAAG CTGAAGCTGG GATTAATAAT 
1050
GGTTCAGTGA CGTTGACAAT AAGTGCAGAG TTTGCTGAAG GCTGTTTAGG 
1100
TCAGTACATG CTTTAA
1150

>AT3G01030.1 longest ORF length:371
MEEQQEFEKP IFEFRPKKLR TSRVSRNLMK KTGFRESMNH YEELSCNYGL 
50
RENPKKTQKS LLDHRFCTRR RRNKKILIRC KECGKGFLYE KCLFNHLQVT 
100
HSEESTRRSL FCRFSIVQRR KRSKRVSRYK KILPRFSVSS SSCTMFPVSV 
150
DDGGLLEVAE SLILLSMSGG KFVNGLEHFG KALGSTQRKF EDGLLRNEQR 
200
LVGEALDSNP EVNLRKDGDF EYGLLSNEQK KLVGISRASV GTSKELSGYL 
250
ANKKGREDDE LGQQKQAGAR ILREETDNEQ KLVRQETAFE DSVSGFEMNI 
300
EHRCGLCHKV FSTYQTLGGH QTFHRMRNKS KSQTKRCREE SIEAEAGINN 
350
GSVTLTISAE FAEGCLGQYM L
400