fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G01140 NOK, ATMYB106 NOECK, myb domain protein 106 (.1)

>AT3G01140.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 631
NcoI C|CATGG 228
NdeI CA|TATG 571
NheI G|CTAGC 615
StyI C|C[AT][AT]GG 175, 228, 741


Click here to view TAIR data

>AT3G01140.1 length:1167
ATGCCAATCC ATGTCAGAGA CCGGGAAAAG GGGCGCTTAC AGAACCTAAA 
50
CAGAGACATC TTCTGTTGTG TTTCTCCATC TATATATCAG AGTGACGCCA 
100
AGAGAGCAGC TTTTGTGATC ATACTGATCA TGATCATATC GCCATGTTGT 
150
GATAAGGCCG GGTTGAAGAA AGGGCCTTGG ACTCCAGAAG AGGATCAGAA 
200
ACTTTTGGCT TATATTGAAG AACATGGCCA TGGAAGCTGG CGTTCTTTGC 
250
CTGAGAAAGC CGGTCTCCAA AGGTGTGGAA AGAGTTGCAG ACTCAGATGG 
300
ACTAACTACC TAAGACCTGA CATCAAGAGA GGCAAATTCA CTGTACAAGA 
350
AGAACAAACC ATCATTCAAC TCCACGCTCT CCTCGGAAAC AGGTGGTCAG 
400
CGATTGCAAC TCATTTACCA AAGAGGACAG ACAACGAGAT CAAGAACTAC 
450
TGGAACACAC ACTTGAAGAA ACGTCTGATC AAAATGGGGA TAGATCCAGT 
500
GACTCACAAG CACAAAAACG AGACTCTTTC GTCTTCCACA GGACAATCAA 
550
AGAACGCAGC CACGCTTAGT CATATGGCTC AATGGGAGAG TGCAAGACTC 
600
GAAGCTGAAG CAAGGCTAGC TAGAGAATCA AAGCTTCTCC ATTTACAGCA 
650
TTACCAAAAC AATAACAACC TTAACAAATC AGCAGCTCCT CAACAACATT 
700
GCTTCACTCA AAAAACATCA ACAAACTGGA CTAAACCAAA CCAAGGAAAC 
750
GGAGACCAAC AGCTTGAATC TCCGACATCG ACGGTGACAT TCTCTGAGAA 
800
TCTTCTGATG CCTTTAGGAA TCCCTACGGA TAGCAGCAGA AATAGAAACA 
850
ATAACAACAA TGAGTCCTCG GCGATGATTG AATTGGCCGT ATCTTCGTCA 
900
ACCTCCTCCG ATGTGAGTCT GGTCAAAGAA CATGAACACG ACTGGATTAG 
950
GCAGATCAAC TGTGGTAGTG GAGGAATAGG AGAAGGATTC ACGAGTCTAT 
1000
TGATCGGTGA TTCGGTCGGC CGGGGTTTAC CCACCGGGAA AAACGAAGCG 
1050
ACGGCGGGCG TGGGGAATGA GAGTGAGTAT AACTACTATG AGGATAACAA 
1100
GAATTACTGG AATAGCATTC TCAACTTGGT TGATTCTTCA CCGTCCGATT 
1150
CCGCGACGAT GTTCTGA
1200

>AT3G01140.1 longest ORF length:388
MPIHVRDREK GRLQNLNRDI FCCVSPSIYQ SDAKRAAFVI ILIMIISPCC 
50
DKAGLKKGPW TPEEDQKLLA YIEEHGHGSW RSLPEKAGLQ RCGKSCRLRW 
100
TNYLRPDIKR GKFTVQEEQT IIQLHALLGN RWSAIATHLP KRTDNEIKNY 
150
WNTHLKKRLI KMGIDPVTHK HKNETLSSST GQSKNAATLS HMAQWESARL 
200
EAEARLARES KLLHLQHYQN NNNLNKSAAP QQHCFTQKTS TNWTKPNQGN 
250
GDQQLESPTS TVTFSENLLM PLGIPTDSSR NRNNNNNESS AMIELAVSSS 
300
TSSDVSLVKE HEHDWIRQIN CGSGGIGEGF TSLLIGDSVG RGLPTGKNEA 
350
TAGVGNESEY NYYEDNKNYW NSILNLVDSS PSDSATMF
400