fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G01600 ANAC044 NAC domain containing protein 44 (.1)

>AT3G01600.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 1011
EcoRV GAT|ATC 1005
HindIII A|AGCTT 649, 770, 929
NcoI C|CATGG 151
NdeI CA|TATG 380
SacI GAGCT|C 92
StyI C|C[AT][AT]GG 151, 972


Click here to view TAIR data

>AT3G01600.1 length:1113
ATGGCGAGGG CTTGGATTGT CGATGGTCGA GGAATTGCAG CCAAAGTTAA 
50
AAATGCCTCT CTTTCTTCAG CTTTGCAGAT CCAAGACTGT GGAGCTCATA 
100
TAAAATGCCC CAACTGCACT TACCGCATTG ACAATAGCAA TGTACTGATT 
150
CCATGGCCTG GCCTTCCTAA AGGTGTCAAG TTTGAGCCAA CTGATGAGGA 
200
CATTATCGAA TTTTTGGAAG CTAAATGTGG GATTGGTGGC TCTGAACCTC 
250
ATGTGCTTAT CGAAGAGTTC ATTCGTCCTG TCACTGAAGA TGTTGGAATC 
300
AATTACACTC ACCCTCAAAA CCTTCCTGGT GCAAACAAAG ATGGAGTGAG 
350
TGTCTTCTTC TTTCACAAGA CAGTGCAGGC ATATGGAACA GGACAGAGGA 
400
AACGCAGAAA GATCACACCG ACACTTGTGA ACGATGAACC AGTTCGTTGG 
450
CACAAGACAG GCAGAACCAA ACCTGTGATG CTCAGTGGAG TCCAAAGGGG 
500
TTGCAAGAAG ATCATGGTGC TCTACAAGAG CGCTAGAAAG GGAACGAAGC 
550
CCGAGAAATC AAACTGGGTT CTGCATCAAT ACCATCTAGG AACAGAAGGA 
600
AAGGAGATAG GAGACTATGT TGTTTCCAAG ATCACATATC AGCAGCAGAA 
650
GCTTGGGGAA AATCCTGATG AAGGTGAGAG TAGTTCCGGG GTTAGAGGTG 
700
GCCCAACAAC ACCAAAGACG AATACTCCTA CACCACCTAG CCTTGTAGAT 
750
GGTGTCGCTG GAGATGAAGA AGCTTTTGAT GATTTAAAGA TGTTTGATCC 
800
ATTTTTTGAG GAACTGGACA GCATTCCTGA AGCTGCTTTA GGGAAGATGT 
850
GGTCCAAAAA AGCTCGAATG GATGAGGAAT TTGTTGTGAA CCTAAGTGAA 
900
GATAACTTAA TATGCGACGA AAGCATGGAA GCTTCGTCTC TTTGGGAAAA 
950
TCAGGTTCTC CCCAATCCTA GCCTTGGAAC TGTTGGGGAC TTCGATGGTT 
1000
TTTCGATATC AGATCTGGAG AATGCAGATT TGGGGACTCC CCCTGATTTC 
1050
CTCACTGTAA GATCCTGCTT GAAAAAAACC TTGTTTACTT TCGGAAAATT 
1100
CAATGGAACT TAA
1150

>AT3G01600.1 longest ORF length:370
MARAWIVDGR GIAAKVKNAS LSSALQIQDC GAHIKCPNCT YRIDNSNVLI 
50
PWPGLPKGVK FEPTDEDIIE FLEAKCGIGG SEPHVLIEEF IRPVTEDVGI 
100
NYTHPQNLPG ANKDGVSVFF FHKTVQAYGT GQRKRRKITP TLVNDEPVRW 
150
HKTGRTKPVM LSGVQRGCKK IMVLYKSARK GTKPEKSNWV LHQYHLGTEG 
200
KEIGDYVVSK ITYQQQKLGE NPDEGESSSG VRGGPTTPKT NTPTPPSLVD 
250
GVAGDEEAFD DLKMFDPFFE ELDSIPEAAL GKMWSKKARM DEEFVVNLSE 
300
DNLICDESME ASSLWENQVL PNPSLGTVGD FDGFSISDLE NADLGTPPDF 
350
LTVRSCLKKT LFTFGKFNGT 
400