fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G02150 TFPD, PTF1, TCP13 TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 13, plastid transcription factor 1 (.1.2)

>AT3G02150.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 183
NdeI CA|TATG 1060
PvuII CAG|CTG 791
StyI C|C[AT][AT]GG 179


Click here to view TAIR data

>AT3G02150.2 length:1068
ATGAATATCG TCTCTTGGAA AGATGCAAAC GACGAAGTTG CAGGCGGCGC 
50
TACGACAAGA CGTGAAAGAG AAGTAAAAGA GGATCAAGAA GAAACCGAAG 
100
TCAGAGCCAC CAGTGGCAAA ACCGTAATTA AAAAGCAGCC TACATCGATC 
150
TCTTCTTCTT CTTCTTCGTG GATGAAATCC AAGGATCCGA GGATTGTTAG 
200
GGTTTCACGC GCCTTTGGAG GCAAAGACCG TCACAGCAAA GTGTGTACGT 
250
TACGTGGACT ACGTGACAGA CGCGTGAGAT TATCAGTCCC AACGGCTATT 
300
CAGCTCTACG ATCTTCAAGA ACGGCTCGGT GTTGACCAGC CTAGCAAAGC 
350
CGTTGACTGG TTGCTTGATG CAGCTAAAGA GGAGATCGAC GAGCTACCTC 
400
CGTTACCTAT CTCGCCGGAA AATTTCAGCA TCTTCAACCA TCATCAGTCC 
450
TTCTTGAATC TTGGTCAACG GCCCGGTCAA GATCCGACCC AACTCGGGTT 
500
TAAAATCAAT GGATGTGTAC AAAAGTCTAC TACTACTAGC CGCGAAGAAA 
550
ACGATAGAGA GAAAGGAGAA AACGATGTCG TTTACACAAA CAATCATCAT 
600
GTTGGGTCTT ATGGAACTTA TCACAACCTG GAACATCATC ATCATCATCA 
650
CCAACATTTG AGTTTACAGG CAGATTATCA TAGTCATCAA CTACATAGTC 
700
TTGTCCCATT TCCATCACAA ATTTTGGTAT GTCCAATGAC GACATCACCA 
750
ACAACTACAA CTATACAATC TTTGTTTCCA TCATCATCGT CAGCTGGTTC 
800
AGGGACTATG GAGACATTAG ATCCGAGGCA AATGGTAAGC CATTTTCAAA 
850
TGCCATTAAT GGGTAATTCT TCATCTTCGT CTTCCCAAAA CATTTCGACA 
900
TTATATTCGT TGTTACATGG TAGTAGTAGC AACAATGGTG GTAGAGACAT 
950
TGATAATCGG ATGTCGTCGG TCCAATTCAA CCGAACTAAT AGCACTACAA 
1000
CGGCTAACAT GTCGAGGCAT CTAGGCTCGG AGCGTTGTAC AAGTAGAGGA 
1050
AGTGATCACC ATATGTGA
1100

>AT3G02150.2 longest ORF length:355
MNIVSWKDAN DEVAGGATTR REREVKEDQE ETEVRATSGK TVIKKQPTSI 
50
SSSSSSWMKS KDPRIVRVSR AFGGKDRHSK VCTLRGLRDR RVRLSVPTAI 
100
QLYDLQERLG VDQPSKAVDW LLDAAKEEID ELPPLPISPE NFSIFNHHQS 
150
FLNLGQRPGQ DPTQLGFKIN GCVQKSTTTS REENDREKGE NDVVYTNNHH 
200
VGSYGTYHNL EHHHHHHQHL SLQADYHSHQ LHSLVPFPSQ ILVCPMTTSP 
250
TTTTIQSLFP SSSSAGSGTM ETLDPRQMVS HFQMPLMGNS SSSSSQNIST 
300
LYSLLHGSSS NNGGRDIDNR MSSVQFNRTN STTTANMSRH LGSERCTSRG 
350
SDHHM
400