| Locus |
Common name |
Short description |
| AT3G02550 |
LBD41 |
LOB domain-containing protein 41 (.1) |
>AT3G02550.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, AccI, AccIII(BspMII), AclI, AfeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BmrI, BpmI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspMI, BsrBI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuII, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| Acc65I
| G|GTACC |
711 |
| AccII(FnuDII)
| CG|CG |
421, 487 |
| AciI
| C|CGC |
365, 417 |
| AflII
| C|TTAAG |
373 |
| AflIII
| A|CPuPyGT |
748, 766 |
| AgeI
| A|CCGGT |
321, 687 |
| AluI
| AG|CT |
8, 100, 214, 279, 660, 777 |
| AlwNI
| CAGNNN|CTG |
344 |
| AvaII
| G|G[AT]CC |
168, 363 |
| BanI
| G|GPyPuCC |
711 |
| BanII
| GPuGCPy|C |
645 |
| BfaI
| C|TAG |
525 |
| BglI
| GCCNNNN|NGGC |
300, 423 |
| BglII
| A|GATCT |
377 |
| BlpI
| GC|TNAGC |
470 |
| BsaAI
| PyAC|GTPu |
695, 747, 765 |
| BsaHI
| GPu|CGPyC |
292 |
| BsaJI
| C|CNNGG |
187, 296, 360, 401, 422 |
| BsaWI
| [AT]|CCGG[AT] |
321, 687 |
| BsiEI
| CGPuPy|CG |
199, 353 |
| BsiHKAI
| G[AT]GC[AT]|C |
762 |
| BslI
| CCNNNNN|NNGG |
243 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
645, 762 |
| BspHI
| T|CATGA |
149, 573 |
| BspT107I(HgiCI)
| G|G[TC][AG]CC |
711 |
| BsrDI
| GCAATGNN| |
604 |
| BsrFI
| Pu|CCGGPy |
166, 321, 687 |
| BsrI
| ACTGGN| |
430 |
| BssKI
| |CCNGG |
186 |
| BstF5I
| GGATGNN| |
6, 20, 406 |
| BstNI
| CC|[AT]GG |
186 |
| BstUI
| CG|CG |
421, 487 |
| BstYI
| Pu|GATCPy |
377 |
| BtgI
| C|CPuPyGG |
296, 422 |
| Cac8I
| GCN|NGC |
99 |
| Cfr10I
| [AG]|CCGG[TC] |
166, 321, 687 |
| DdeI
| C|TNAG |
469, 610, 775 |
| DpnI
| GA-CH3|TC |
79, 198, 238, 331, 352, 376, 730 |
| DpnII
| |GATC |
79, 198, 238, 331, 352, 376, 730 |
| EaeI
| Py|GGCCPu |
135, 357 |
| Fnu4HI
| GC|NGC |
278, 345, 417, 423, 567 |
| HaeIII
| GG|CC |
63, 134, 356 |
| HhaI
| GCG|C |
95 |
| HinP1I
| G|CGC |
95 |
| HindIII
| A|AGCTT |
215, 661 |
| HinfI
| G|ANTC |
145, 233, 501, 534, 545, 591 |
| HpaII
| C|CGG |
165, 320, 632, 648, 686 |
| Hpy188I
| TCN|GA |
32, 196, 236, 388, 504, 516, 555, 594, 609, 752 |
| Hpy99I
| CG[AT]CG| |
349, 485, 538 |
| HpyCH4III
| ACN|GT |
111, 483 |
| HpyCH4IV
| A|CGT |
694, 746, 764 |
| HpyCH4V
| TG|CA |
20, 207 |
| KpnI
| GGTAC|C |
711 |
| MboI
| |GATC |
79, 198, 238, 331, 352, 376, 730 |
| MseI
| T|TAA |
372, 674, 717 |
| MspA1I
| C[AC]G|C[GT]G |
422 |
| MspI
| C|CGG |
165, 320, 632, 648, 686 |
| MwoI
| GCNNNNN|NNGC |
95, 300, 342, 423, 495, 742 |
| N.BstNBI
| GAGTCNNNN|N |
550 |
| NlaIII
| CATG| |
148, 572, 704 |
| NlaIV
| GGN|NCC |
169, 646, 711 |
| NruI
| TCG|CGA |
488 |
| PmlI
| CAC|GTG |
695, 747, 765 |
| PspGI
| |CC[AT]GG |
186 |
| PvuI
| CGAT|CG |
199, 353 |
| RsaI
| GT|AC |
710 |
| SacII
| CCGC|GG |
422 |
| Sau3AI
| |GATC |
79, 198, 238, 331, 352, 376, 730 |
| Sau96I
| G|GNCC |
168, 363 |
| ScrFI
| CC|NGG |
186 |
| SmlI
| C|TPyPuAG |
373 |
| StyI
| C|C[AT][AT]GG |
360, 401 |
| Taqƒ¿I
| T|CGA |
681 |
| TfiI
| G|A[AT]TC |
233, 501, 534, 591 |
| TseI
| G|C[AT]GC |
278, 345, 567 |
| Tsp45I
| |GT[CG]AC |
529, 692 |
| Tsp509I
| |AATT |
272 |
Click here to view TAIR data
>AT3G02550.1 length:792
ATGCGGATGA GCTGTAATGG ATGCAGAGTT CTTCGGAAAG GGTGTAGTGA | 50 |
GGATTGTAGT ATAAGGCCGT GTTTGGCTTG GATCAAATCG CCTGAAGCGC | 100 |
AAGCTAACGC AACTGTCTTT CTCGCCAAGT TCTATGGCCG TGCTGGACTC | 150 |
ATGAACCTCA TCAACGCCGG TCCCAATCAC CTTCGTCCTG GGATTTTCCG | 200 |
ATCGTTGTTG CACGAAGCTT GTGGGAGGAT TGTGAATCCG ATCTATGGTT | 250 |
CGGTGGGTTT GTTGTGGTCG GGGAATTGGC AGCTTTGTCA AGACGCCGTG | 300 |
GAGGCTGTGA TGAAAGGAGA ACCGGTCAAA GAGATCGCCA CAGACGCTGC | 350 |
GACGATCGGC CAAGGTCCGC CTCTTAAGAT CTACGACATC CGACATATCT | 400 |
CCAAGGATGA TAACTCTGCC GCCGCGGCTA CTGGCTCAAC CGATTTGAAA | 450 |
CTTGCGAAAA CTCGCCGTGC TAAGCGGGTC TCCACCGTCG CGATACAGGC | 500 |
GGAATCGGAG GGAAAGTCTG ACGAGGCTAG TCACGATTCG TCGTTGAGTC | 550 |
ATCAGTCTGA AATAGTGGCT GCTCATGAAG GAGAGAGCAA GGAATCCGAG | 600 |
AGCAATGTCT CTGAGGTTTT GGCATTCTCG CCTCCGGCTG TGAAGGGCTC | 650 |
CGGCGAGATA AAGCTTGACC TAACTTTAAG GCTCGAACCG GTGTCACGTG | 700 |
CGTATCATGT GGTACCTGTT AAGAAGAGAA GGATCGGCGT GTTTGGCACG | 750 |
TGTCAGAAGG AGAGCACGTG TAAGACTGAG CTTATGCTCT AA | 800 |
>AT3G02550.1 longest ORF length:263
MRMSCNGCRV LRKGCSEDCS IRPCLAWIKS PEAQANATVF LAKFYGRAGL | 50 |
MNLINAGPNH LRPGIFRSLL HEACGRIVNP IYGSVGLLWS GNWQLCQDAV | 100 |
EAVMKGEPVK EIATDAATIG QGPPLKIYDI RHISKDDNSA AAATGSTDLK | 150 |
LAKTRRAKRV STVAIQAESE GKSDEASHDS SLSHQSEIVA AHEGESKESE | 200 |
SNVSEVLAFS PPAVKGSGEI KLDLTLRLEP VSRAYHVVPV KKRRIGVFGT | 250 |
CQKESTCKTE LML | 300 |
|