fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G02830 ZFN1 zinc finger protein 1 (.1)

>AT3G02830.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 760
KpnI GGTAC|C 664
SmaI CCC|GGG 960
StyI C|C[AT][AT]GG 331, 523
XbaI T|CTAGA 1108


Click here to view TAIR data

>AT3G02830.1 length:1194
ATGGATTTTA ATGCCGGAGT TCCCATGTCT TCTCTTTCAC CTTTGATGAA 
50
TCAAGATGCA ATGTGGCAAA TGAATTTGAG TTCAGATGAA ACAATGGAAA 
100
CTGGTTCTTA CCCTGAACGA CCAGGAGAGC CTGATTGTTC TTATTACATA 
150
AGAACTGGTC TTTGTAGATT TGGCTCTACT TGTCGGTTCA ACCATCCTCG 
200
TGATCGGGAA CTGGTTATAG CTACTGCAAG GATGAGAGGA GAATACCCTG 
250
AAAGGATTGG TCAGCCTGAA TGCGAGTACT ATTTGAAGAC AGGAACCTGC 
300
AAGTTTGGAG TAACATGTAA GTTTCATCAT CCAAGGAACA AAGCTGGGAT 
350
TGCTGGAAGA GTCTCTCTCA ATATGTTAGG CTATCCTCTA CGCTCGAATG 
400
AGGTTGATTG TGCTTATTTC CTAAGAACCG GACACTGTAA ATTTGGTGGT 
450
ACTTGTAAAT TCAACCACCC TCAGCCTCAA CCAACCAACA TGATGGTTCC 
500
TACCTCAGGG CAACAGTCTT ATCCTTGGTC AAGAGCTTCT TTTATTGCCA 
550
GCCCTCGTTG GCAAGATCCG TCTAGCTACG CTTCCTTAAT CATGCCTCAA 
600
GGAGTTGTCC CGGTTCAAGG ATGGAACCCT TACAGTGGTC AGCTCGGCTC 
650
AGTTTCTCCT TCAGGTACCG GAAATGATCA AAACTACAGA AATTTACAGC 
700
AGAACGAGAC AATAGAGTCA GGCTCTCAGT CTCAAGGATC ATTCTCGGGT 
750
TACAATCCGG GATCCTCTGT TCCGCTAGGA GGGTATTATG CATTGCCGAG 
800
GGAAAATGTG TTCCCGGAGA GACCAGGACA ACCCGAATGC CAATTCTACA 
850
TGAAGACAGG TGACTGCAAA TTTGGCACAG TTTGCAAATT TCACCATCCT 
900
AGAGACAGAC AAGCTCCTCC TCCTGATTGT CTCTTAAGCT CCATTGGCCT 
950
CCCCTTACGC CCGGGAGAAC CGTTGTGTGT GTTCTATACA CGCTATGGAA 
1000
TCTGCAAATT TGGTCCAAGC TGTAAATTTG ATCACCCAAT GCGAGTATTC 
1050
ACATACGACA ACACAGCTTC AGAGACAGAT GAGGTAGTGG AAACATCAAC 
1100
AGGGAAATCT AGAAGACTCT CTGTGTCTGA AACAAGACAA GCAGCAACAA 
1150
CATCCTCTGG TAAAGACACT ACCATTGATA ATACACAGCA GTGA
1200

>AT3G02830.1 longest ORF length:397
MDFNAGVPMS SLSPLMNQDA MWQMNLSSDE TMETGSYPER PGEPDCSYYI 
50
RTGLCRFGST CRFNHPRDRE LVIATARMRG EYPERIGQPE CEYYLKTGTC 
100
KFGVTCKFHH PRNKAGIAGR VSLNMLGYPL RSNEVDCAYF LRTGHCKFGG 
150
TCKFNHPQPQ PTNMMVPTSG QQSYPWSRAS FIASPRWQDP SSYASLIMPQ 
200
GVVPVQGWNP YSGQLGSVSP SGTGNDQNYR NLQQNETIES GSQSQGSFSG 
250
YNPGSSVPLG GYYALPRENV FPERPGQPEC QFYMKTGDCK FGTVCKFHHP 
300
RDRQAPPPDC LLSSIGLPLR PGEPLCVFYT RYGICKFGPS CKFDHPMRVF 
350
TYDNTASETD EVVETSTGKS RRLSVSETRQ AATTSSGKDT TIDNTQQ
400