fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G02860 zinc ion binding (.1.2)

>AT3G02860.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 622
HindIII A|AGCTT 167, 269
NcoI C|CATGG 597
SacI GAGCT|C 923
StyI C|C[AT][AT]GG 597


Click here to view TAIR data

>AT3G02860.1 length:939
ATGGATGCTC AAGCGAAGAA GAAGGCCATG TTCCGGTCTA AACTCAACGC 
50
CAAGAAGAAA GACACCCGCA TAGATTCTCC TCTCGTTAGG TACAACGAAT 
100
CAGACCAGCC TGTGTGTCGA GTTTGCAATG TCGTCTTGAA ATCTGAATCA 
150
CTCTGGGATG TACATCAAGC TTCTCGTAAG CACCACGAGG CCATTGATAG 
200
TCTCAAGGCT AGTGCAGCGG GAGTCCAACG GGGTAGCAAA CCTGCTGAAA 
250
CTCGGCCAAC GAAAATTGAA GCTTTGGCTA AATCATCCAA TTCTCAGACA 
300
TCATCTGGTC TTCCGCCAAA TTTCTTCGAA AATCGTGAGC CTGCTAGAGA 
350
AGTAGAACCA GCAAAATCCA AGAATTTAGA GCAATCAAAG CACACTATAG 
400
GATCTGAAAC AAATAAGTCA AAGGGACCTC TTCCAGCCGG ATTCTTTGAT 
450
AATCAGAAAA CTGATTCTTC AAATACCAAA ACCACCAGTG AACCTAAACA 
500
GAGTCAGACA CAGACCACTG GTCCAGAAAC AAAACCAATG GTGAATGGAA 
550
ACCTTCCAAC CGGTTTTTTT GATAATAAAG AAGCTGACCT GCTTGCCCAT 
600
GGAATCAAGC TCGTCAAACC AGATATCAAG GATGAATATA AAGAATTTGA 
650
GAAGTTGATA CAAGATGATT TGCAGGTAGT GGATAGCCGC ATGGAAGAAG 
700
AAGAGGTTGA TGCTGCGGAA ACTATAGAAG AGGAGGAACA ACGAGAGCAA 
750
AGATCATACA AAGAGAAAGT AGAGATTCTG AAGAGGAAGA AAATGGAACT 
800
TAAAGCGGCA AGATTAGCGA AGCGCAGTAA AACCTCTGAG GGGTCTGTTA 
850
AAAAGCCGAA GAAGACAGAA GAAGAATCGC CCAGCGATGA GGAGGATGAC 
900
GAGGATTCTG CTGTTGATTG GAGAGCTCAA CATCTTTGA
950

>AT3G02860.1 longest ORF length:312
MDAQAKKKAM FRSKLNAKKK DTRIDSPLVR YNESDQPVCR VCNVVLKSES 
50
LWDVHQASRK HHEAIDSLKA SAAGVQRGSK PAETRPTKIE ALAKSSNSQT 
100
SSGLPPNFFE NREPAREVEP AKSKNLEQSK HTIGSETNKS KGPLPAGFFD 
150
NQKTDSSNTK TTSEPKQSQT QTTGPETKPM VNGNLPTGFF DNKEADLLAH 
200
GIKLVKPDIK DEYKEFEKLI QDDLQVVDSR MEEEEVDAAE TIEEEEQREQ 
250
RSYKEKVEIL KRKKMELKAA RLAKRSKTSE GSVKKPKKTE EESPSDEEDD 
300
EDSAVDWRAQ HL
350