fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G02860 zinc ion binding (.1.2)

>AT3G02860.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 625
HindIII A|AGCTT 167, 269
NcoI C|CATGG 600
SacI GAGCT|C 926
StyI C|C[AT][AT]GG 600


Click here to view TAIR data

>AT3G02860.2 length:942
ATGGATGCTC AAGCGAAGAA GAAGGCCATG TTCCGGTCTA AACTCAACGC 
50
CAAGAAGAAA GACACCCGCA TAGATTCTCC TCTCGTTAGG TACAACGAAT 
100
CAGACCAGCC TGTGTGTCGA GTTTGCAATG TCGTCTTGAA ATCTGAATCA 
150
CTCTGGGATG TACATCAAGC TTCTCGTAAG CACCACGAGG CCATTGATAG 
200
TCTCAAGGCT AGTGCAGCGG GAGTCCAACG GGGTAGCAAA CCTGCTGAAA 
250
CTCGGCCAAC GAAAATTGAA GCTTTGGCTA AATCATCCAA TTCTCAGACA 
300
TCATCTGGTC TTCCGCCAAA TTTCTTCGAA AATCGTGAGC CTGCTAGAGC 
350
AGAAGTAGAA CCAGCAAAAT CCAAGAATTT AGAGCAATCA AAGCACACTA 
400
TAGGATCTGA AACAAATAAG TCAAAGGGAC CTCTTCCAGC CGGATTCTTT 
450
GATAATCAGA AAACTGATTC TTCAAATACC AAAACCACCA GTGAACCTAA 
500
ACAGAGTCAG ACACAGACCA CTGGTCCAGA AACAAAACCA ATGGTGAATG 
550
GAAACCTTCC AACCGGTTTT TTTGATAATA AAGAAGCTGA CCTGCTTGCC 
600
CATGGAATCA AGCTCGTCAA ACCAGATATC AAGGATGAAT ATAAAGAATT 
650
TGAGAAGTTG ATACAAGATG ATTTGCAGGT AGTGGATAGC CGCATGGAAG 
700
AAGAAGAGGT TGATGCTGCG GAAACTATAG AAGAGGAGGA ACAACGAGAG 
750
CAAAGATCAT ACAAAGAGAA AGTAGAGATT CTGAAGAGGA AGAAAATGGA 
800
ACTTAAAGCG GCAAGATTAG CGAAGCGCAG TAAAACCTCT GAGGGGTCTG 
850
TTAAAAAGCC GAAGAAGACA GAAGAAGAAT CGCCCAGCGA TGAGGAGGAT 
900
GACGAGGATT CTGCTGTTGA TTGGAGAGCT CAACATCTTT GA
950

>AT3G02860.2 longest ORF length:313
MDAQAKKKAM FRSKLNAKKK DTRIDSPLVR YNESDQPVCR VCNVVLKSES 
50
LWDVHQASRK HHEAIDSLKA SAAGVQRGSK PAETRPTKIE ALAKSSNSQT 
100
SSGLPPNFFE NREPARAEVE PAKSKNLEQS KHTIGSETNK SKGPLPAGFF 
150
DNQKTDSSNT KTTSEPKQSQ TQTTGPETKP MVNGNLPTGF FDNKEADLLA 
200
HGIKLVKPDI KDEYKEFEKL IQDDLQVVDS RMEEEEVDAA ETIEEEEQRE 
250
QRSYKEKVEI LKRKKMELKA ARLAKRSKTS EGSVKKPKKT EEESPSDEED 
300
DEDSAVDWRA QHL
350