|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G02940 | ATMYB107 | myb domain protein 107 (.1) |
>AT3G02940.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRV | GAT|ATC | 190 |
| NcoI | C|CATGG | 46, 99, 871 |
| PvuII | CAG|CTG | 212 |
| SacI | GAGCT|C | 113 |
| SalI | G|TCGAC | 840 |
| StyI | C|C[AT][AT]GG | 46, 99, 648, 871, 946 |
Click here to view TAIR data
>AT3G02940.1 length:966
ATGGGGAGAT CACCGTGTTG CGATGAGAGC GGATTAAAGA AAGGGCCATG | 50 |
GACGCCAGAA GAAGATCAGA AACTGATAAA TCACATAAGA AAACACGGCC | 100 |
ATGGAAGCTG GAGAGCTCTA CCCAAGCAAG CCGGTTTAAA CCGGTGTGGG | 150 |
AAGAGTTGCA GATTGAGATG GACTAATTAC TTGAGACCAG ATATCAAAAG | 200 |
AGGAAACTTC ACAGCTGAGG AAGAACAAAC TATCATTAAC CTTCATTCTC | 250 |
TTCTTGGGAA CAAGTGGTCG TCTATAGCTG GTCATCTCCC AGGAAGAACG | 300 |
GATAACGAAA TAAAGAACTA TTGGAACACG CATATTAGAA AGAAACTTAT | 350 |
TCAGATGGGA ATCGATCCGG TGACCCATAG GCCAAGAACC GACCATCTAA | 400 |
ACGTTCTAGC CGCTCTCCCG CAACTACTAG CTGCCGCAAA TTTCAACAAC | 450 |
CTCTTGAATC TAAATCAAAA TATACAATTG GATGCAACAA GTGTTGCGAA | 500 |
AGCCCAACTG TTACATAGTA TGATTCAAGT CCTTAGCAAC AACAATACCT | 550 |
CTTCTTCCTT TGACATTCAT CACACAACCA ATAATCTCTT TGGCCAATCT | 600 |
TCTTTCTTAG AGAACCTACC AAATATTGAA AATCCTTATG ATCAAACCCA | 650 |
AGGCCTCTCT CACATTGACG ATCAGCCTCT GGATTCGTTT TCTAGCCCGA | 700 |
TTCGAGTAGT TGCTTATCAA CATGATCAGA ATTTTATTCC GCCCTTGATT | 750 |
TCGACATCTC CTGATGAGTC TAAGGAAACC CAAATGATGG TCAAGAACAA | 800 |
GGAAATCATG AAGTATAATG ATCATACTTC AAACCCTTCG TCGACCTCAA | 850 |
CTTTTACACA AGATCACCAG CCATGGTGTG ACATAATTGA TGATGAAGCA | 900 |
AGTGATTCTT ATTGGAAAGA GATCATAGAG CAAACTTGTT CGGAGCCTTG | 950 |
GCCATTTCGT GAATAG | 1000 |
>AT3G02940.1 longest ORF length:321
MGRSPCCDES GLKKGPWTPE EDQKLINHIR KHGHGSWRAL PKQAGLNRCG | 50 |
KSCRLRWTNY LRPDIKRGNF TAEEEQTIIN LHSLLGNKWS SIAGHLPGRT | 100 |
DNEIKNYWNT HIRKKLIQMG IDPVTHRPRT DHLNVLAALP QLLAAANFNN | 150 |
LLNLNQNIQL DATSVAKAQL LHSMIQVLSN NNTSSSFDIH HTTNNLFGQS | 200 |
SFLENLPNIE NPYDQTQGLS HIDDQPLDSF SSPIRVVAYQ HDQNFIPPLI | 250 |
STSPDESKET QMMVKNKEIM KYNDHTSNPS STSTFTQDHQ PWCDIIDDEA | 300 |
SDSYWKEIIE QTCSEPWPFR E | 350 |