fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G02990 ATHSFA1E heat shock transcription factor A1E (.1)

>AT3G02990.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 1125
EcoRI G|AATTC 702
EcoRV GAT|ATC 749
PstI CTGCA|G 520, 950
SacI GAGCT|C 54, 897, 1074


Click here to view TAIR data

>AT3G02990.1 length:1407
ATGGGAACGG TTTGCGAATC TGTAGCGACG GCGAAATCTT CGACGGCGGT 
50
GATGAGCTCC ATTCCGCCTT TTCTGAGCAA AACGTACGAT ATGGTTGACG 
100
ATCCATTGAC GGACGACGTG GTGTCTTGGA GCAGCGGAAA CAACAGCTTC 
150
GTGGTTTGGA ACGTGCCTGA GTTCGCCAAA CAGTTTCTAC CAAAGTATTT 
200
CAAGCACAAC AATTTCTCCA GCTTCGTCAG ACAGCTCAAT ACTTATGGTT 
250
TTAGAAAAGT TGATCCAGAC CGCTGGGAGT TTGCAAACGA GGGCTTTTTA 
300
AGAGGCCAAA AGCAAATACT AAAGAGTATT GTCCGGCGAA AACCTGCACA 
350
AGTGCAGCCT CCACAACAAC CTCAAGTTCA GCACTCATCT GTGGGTGCGT 
400
GCGTTGAAGT GGGCAAATTT GGACTCGAAG AGGAAGTGGA AAGACTTCAG 
450
CGCGATAAGA ACGTCCTTAT GCAGGAACTT GTAAGGTTGA GGCAGCAACA 
500
ACAAGTTACC GAACATCATC TGCAGAATGT GGGGCAGAAA GTTCATGTGA 
550
TGGAGCAGAG GCAGCAACAG ATGATGTCCT TTCTAGCAAA GGCTGTCCAA 
600
AGTCCAGGTT TCTTAAACCA ATTTTCTCAG CAGAGTAATG AAGCAAACCA 
650
ACACATTTCT GAAAGCAACA AAAAGAGGAG GCTACCTGTT GAGGACCAGA 
700
TGAATTCTGG CAGTCATGGG GTTAATGGTC TTAGCCGCCA GATTGTGAGA 
750
TATCAGTCAT CGATGAACGA TGCAACAAAC ACTATGCTTC AACAGATACA 
800
GCAGATGAGT AATGCACCTA GCCATGAATC TCTCTCAAGC AATAATGGTA 
850
GCTTTCTTTT GGGCGATGTT CCAAATTCTA ACATTTCAGA CAATGGGAGC 
900
TCCTCAAATG GATCACCTGA AGTTACATTG GCAGATGTTT CATCCATTCC 
950
TGCAGGCTTC TATCCTGCAA TGAAGTACCA CGAGCCTTGT GAAACAAATC 
1000
AAGTCATGGA GACCAATTTG CCTTTTTCTC AAGGTGATCT CTTACCTCCA 
1050
ACGCAAGGAG CAGCAGCTTC TGGGAGCTCA AGTTCGGATC TTGTTGGATG 
1100
CGAGACAGAT AATGGAGAGT GTTTGGATCC AATAATGGCT GTTTTGGATG 
1150
GCGCACTCGA ACTAGAAGCT GATACCTTAA ATGAGTTGCT TCCTGAAGTC 
1200
CAAGATTCTT TTTGGGAACA GTTCATTGGT GAGAGCCCAG TGATTGGTGA 
1250
GACAGATGAG TTAATCTCAG GATCAGTGGA AAATGAACTG ATATTGGAGC 
1300
AACTAGAGTT ACAATCAACC CTGAGTAATG TGTGGAGCAA GAATCAACAA 
1350
ATGAACCATC TTACTGAACA GATGGGACTT CTCACATCAG ATGCTCTCAG 
1400
AAAATGA
1450

>AT3G02990.1 longest ORF length:468
MGTVCESVAT AKSSTAVMSS IPPFLSKTYD MVDDPLTDDV VSWSSGNNSF 
50
VVWNVPEFAK QFLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL 
100
RGQKQILKSI VRRKPAQVQP PQQPQVQHSS VGACVEVGKF GLEEEVERLQ 
150
RDKNVLMQEL VRLRQQQQVT EHHLQNVGQK VHVMEQRQQQ MMSFLAKAVQ 
200
SPGFLNQFSQ QSNEANQHIS ESNKKRRLPV EDQMNSGSHG VNGLSRQIVR 
250
YQSSMNDATN TMLQQIQQMS NAPSHESLSS NNGSFLLGDV PNSNISDNGS 
300
SSNGSPEVTL ADVSSIPAGF YPAMKYHEPC ETNQVMETNL PFSQGDLLPP 
350
TQGAAASGSS SSDLVGCETD NGECLDPIMA VLDGALELEA DTLNELLPEV 
400
QDSFWEQFIG ESPVIGETDE LISGSVENEL ILEQLELQST LSNVWSKNQQ 
450
MNHLTEQMGL LTSDALRK
500