fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G03200 ANAC045 NAC domain containing protein 45 (.1)

>AT3G03200.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 1063
HpaI GTT|AAC 721
NcoI C|CATGG 142, 840
NdeI CA|TATG 443, 509, 958
StyI C|C[AT][AT]GG 142, 840
XbaI T|CTAGA 90


Click here to view TAIR data

>AT3G03200.1 length:1440
ATGGCTCCTG TCTCGTTACC TCCAGGTTTC CGATTCCATC CAACAGACGA 
50
GGAACTAATT ACTTACTATC TAAAAAGAAA GATCAACGGT CTAGAAATCG 
100
AACTTGAAGT TATCGCTGAA GTTGATCTTT ACAAGTGTGA GCCATGGGAC 
150
TTACCAGGGA AGTCCTTGCT TCCGAGCAAA GACCAAGAAT GGTACTTCTT 
200
CAGCCCACGA GACCGGAAGT ATCCCAACGG CTCAAGGACA AACCGGGCAA 
250
CTAAAGGCGG TTATTGGAAG GCTACAGGTA AAGACCGCCG AGTTAGTTGG 
300
AGAGACCGAG CCATAGGAAC CAAGAAGACA TTGGTTTACT ACCGTGGGCG 
350
CGCGCCACAT GGCATAAGAA CTGGTTGGGT CATGCACGAA TATCGACTTG 
400
ATGAAACAGA ATGTGAGCCT TCTGCATACG GCATGCAGGA CGCATATGCA 
450
CTTTGTCGTG TGTTCAAAAA GATTGTTATT GAAGCTAAGC CAAGAGATCA 
500
ACATCGGTCA TATGTCCACG CGATGTCGAA TGTGAGTGGT AATTGCTCAT 
550
CGAGTTTTGA CACTTGTTCG GATCTCGAAA TCAGTTCAAC TACTCATCAA 
600
GTTCAAAACA CATTCCAACC GCGATTTGGC AACGAGCGAT TTAACTCCAA 
650
CGCAATCAGC AACGAGGATT GGTCACAATA CTACGGTTCT TCTTATAGAC 
700
CGTTCCCTAC TCCATATAAG GTTAACACAG AGATCGAATG TTCAATGTTA 
750
CAACACAATA TATATCTACC ACCGTTGCGT GTAGAGAACT CTGCGTTTAG 
800
TGATTCCGAT TTCTTCACGA GTATGACTCA CAACAACGAC CATGGCGTTT 
850
TCGATGACTT TACTTTTGCT GCAAGTAACT CCAACCACAA TAATAGCGTT 
900
GGTGATCAAG TGATCCACGT TGGCAATTAT GATGAACAAT TAATAACATC 
950
TAACCGTCAT ATGAACCAGA CTGGTTATAT AAAAGAGCAG AAGATCAGAT 
1000
CGAGTTTGGA TAATACTGAC GAAGATCCAG GATTTCATGG TAACAATACC 
1050
AATGACAACA TAGATATCGA TGATTTTCTC TCGTTTGATA TATATAACGA 
1100
GGACAACGTG AATCAAATAG AAGATAATGA AGACGTGAAT ACAAATGAAA 
1150
CCCTTGATTC ATCGGGATTC GAGGTGGTTG AAGAAGAAAC TAGATTTAAC 
1200
AACCAAATGC TCATCTCGAC ATATCAAACG ACAAAGATTC TATATCACCA 
1250
AGTCGTACCT TGTCACACGT TGAAAGTTCA CGTCAATCCT ATTAGTCACA 
1300
ATGTGGAAGA GAGAACATTG TTCATTGAAG AGGACAAAGA TTCTTGGTTA 
1350
CAAAGAGCTG AGAAGATCAC GAAGACAAAA CTAACACTTT TTAGTTTAAT 
1400
GGCTCAGCAA TACTACAAAT GTCTTGCTAT TTTTTTCTGA 
1450

>AT3G03200.1 longest ORF length:479
MAPVSLPPGF RFHPTDEELI TYYLKRKING LEIELEVIAE VDLYKCEPWD 
50
LPGKSLLPSK DQEWYFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW 
100
RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETECEP SAYGMQDAYA 
150
LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NCSSSFDTCS DLEISSTTHQ 
200
VQNTFQPRFG NERFNSNAIS NEDWSQYYGS SYRPFPTPYK VNTEIECSML 
250
QHNIYLPPLR VENSAFSDSD FFTSMTHNND HGVFDDFTFA ASNSNHNNSV 
300
GDQVIHVGNY DEQLITSNRH MNQTGYIKEQ KIRSSLDNTD EDPGFHGNNT 
350
NDNIDIDDFL SFDIYNEDNV NQIEDNEDVN TNETLDSSGF EVVEEETRFN 
400
NQMLISTYQT TKILYHQVVP CHTLKVHVNP ISHNVEERTL FIEEDKDSWL 
450
QRAEKITKTK LTLFSLMAQQ YYKCLAIFF
500