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| Locus | Common name | Short description |
| AT3G03260 | HDG8 | homeodomain GLABROUS 8 (.1) |
>AT3G03260.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AclI, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DrdI, EaeI, EagI, EarI, EciI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MspA1I, NaeI, , NarI, NcoI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PciI, PleI, PmeI, PmlI, PpuMI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SspI, StuI, SwaI, XbaI, XcmI, XmaI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 451, 1867 |
| AccII(FnuDII) | CG|CG | 374, 640 |
| AccIII(BspMII) | T|CCGGA | 46, 864, 1438 |
| AciI | C|CGC | 412, 1454 |
| AflIII | A|CPuPyGT | 1076 |
| AluI | AG|CT | 20, 115, 174, 340, 493, 560, 660, 740, 808, 879, 1261, 2048 |
| AlwNI | CAGNNN|CTG | 1035 |
| ApoI | Pu|AATTPy | 579, 1018, 1413 |
| AvaI | C|PyCGPuG | 184 |
| AvaII | G|G[AT]CC | 570, 1199 |
| BanII | GPuGCPy|C | 21, 661 |
| BclI | T|GATCA | 2045 |
| BfaI | C|TAG | 504, 558, 605, 1001 |
| BglII | A|GATCT | 1223, 1233 |
| BlpI | GC|TNAGC | 1265 |
| BsaHI | GPu|CGPyC | 52, 1795 |
| BsaJI | C|CNNGG | 479, 1169, 1799, 1931 |
| BsaWI | [AT]|CCGG[AT] | 46, 864, 1343, 1438 |
| BsiHKAI | G[AT]GC[AT]|C | 21, 331, 661, 922 |
| BsiWI | C|GTACG | 524 |
| BslI | CCNNNNN|NNGG | 345, 360, 945, 1208, 1699 |
| BsoBI | C|PyCGPuG | 184 |
| Bsp1286I | G[GAT]GC[CAT]|C | 21, 331, 661, 922 |
| BspEI | T|CCGGA | 46, 864, 1438 |
| BsrDI | GCAATGNN| | 31, 309, 958, 1108 |
| BsrFI | Pu|CCGGPy | 1507 |
| BssKI | |CCNGG | 1518, 1666, 1700 |
| BstBI | TT|CGAA | 403 |
| BstF5I | GGATGNN| | 1305, 1494, 1762 |
| BstUI | CG|CG | 374, 640 |
| BstYI | Pu|GATCPy | 101, 250, 861, 1058, 1223, 1233, 1973 |
| BtgI | C|CPuPyGG | 479, 1931 |
| Cac8I | GCN|NGC | 412, 759, 1008, 1654, 1922 |
| Cfr10I | [AG]|CCGG[TC] | 1507 |
| DdeI | C|TNAG | 23, 226, 682, 857, 1264 |
| DpnI | GA-CH3|TC | 100, 249, 422, 512, 844, 860, 927, 1045, 1057, 1222, 1232, 1273, 1648, 1810, 1926, 1972, 2044, 2065 |
| DpnII | |GATC | 100, 249, 422, 512, 844, 860, 927, 1045, 1057, 1222, 1232, 1273, 1648, 1810, 1926, 1972, 2044, 2065 |
| DraIII | CACNNN|GTG | 1085 |
| EcoNI | CCTNN|NNNAGG | 945 |
| EcoO109I | PuG|GNCCPy | 352 |
| EcoRI | G|AATTC | 1018 |
| Fnu4HI | GC|NGC | 642, 668, 778, 1036, 1110, 1457, 1775 |
| HaeIII | GG|CC | 350, 904, 1504, 1963, 1990 |
| HincII | GTPy|PuAC | 1511, 1607 |
| HindIII | A|AGCTT | 116 |
| HinfI | G|ANTC | 284, 436, 486, 798, 1480, 1487, 1749 |
| HpaII | C|CGG | 45, 863, 1342, 1437, 1506, 1518, 1665, 1699, 1857 |
| Hpy188I | TCN|GA | 212, 227, 633, 925, 1490, 1970 |
| Hpy99I | CG[AT]CG| | 713, 1916 |
| HpyCH4III | ACN|GT | 427, 477, 816, 1084, 1610, 1635, 1932, 1942, 1959, 2031 |
| HpyCH4IV | A|CGT | 258, 1074, 1123 |
| HpyCH4V | TG|CA | 316, 760, 953, 963, 1569, 1754, 1776, 1842 |
| MboI | |GATC | 100, 249, 422, 512, 844, 860, 927, 1045, 1057, 1222, 1232, 1273, 1648, 1810, 1926, 1972, 2044, 2065 |
| MfeI | C|AATTG | 2082 |
| MseI | T|TAA | 320, 417, 531, 699, 1238 |
| MslI | CAPyNN|NNPuTG | 1813 |
| MspI | C|CGG | 45, 863, 1342, 1437, 1506, 1518, 1665, 1699, 1857 |
| MwoI | GCNNNNN|NNGC | 514, 648, 668, 1004, 1252 |
| N.BstNBI | GAGTCNNNN|N | 803, 1485 |
| NciI | CC|[CG]GG | 1518, 1666, 1700 |
| NdeI | CA|TATG | 566 |
| NlaIII | CATG| | 758, 791, 824, 917, 1021, 1187, 1432, 1752, 1789, 1807, 1831 |
| NlaIV | GGN|NCC | 1633, 1948 |
| NsiI | ATGCA|T | 317, 1843 |
| NspI | PuCATG|Py | 759, 1188 |
| PaeR7I | C|TCGAG | 184 |
| PflFI | GACN|NNGTC | 1434 |
| PflMI | CCANNNN|NTGG | 345, 1208 |
| PshAI | GACNN|NNGTC | 1604 |
| RsaI | GT|AC | 523, 547, 1703, 1816 |
| SacI | GAGCT|C | 21, 661 |
| Sau3AI | |GATC | 100, 249, 422, 512, 844, 860, 927, 1045, 1057, 1222, 1232, 1273, 1648, 1810, 1926, 1972, 2044, 2065 |
| Sau96I | G|GNCC | 351, 570, 1199 |
| ScrFI | CC|NGG | 1518, 1666, 1700 |
| SfcI | C|TPuPyAG | 1227 |
| SmlI | C|TPyPuAG | 184, 239, 664, 1285, 1911 |
| SpeI | A|CTAGT | 1002 |
| SphI | GCATG|C | 759 |
| StyI | C|C[AT][AT]GG | 1169, 1799 |
| Taqƒ¿I | T|CGA | 169, 183, 312, 402, 711, 795, 1047, 1463, 1484, 1596, 2000 |
| TfiI | G|A[AT]TC | 436, 1487 |
| TliI | C|TCGAG | 184 |
| TseI | G|C[AT]GC | 778, 1036, 1110, 1457, 1775 |
| Tsp45I | |GT[CG]AC | 295, 430, 813, 1079, 1278, 1339, 1662 |
| Tsp509I | |AATT | 162, 443, 529, 578, 690, 913, 1017, 1206, 1389, 1412, 1444, 2081 |
| TspRI | NNCA[CG]TGNN| | 1534, 1613, 2034 |
| Tth111I | GACN|NNGTC | 1434 |
| XhoI | C|TCGAG | 184 |
| XmnI | GAANN|NNTTC | 1414 |
Click here to view TAIR data
>AT3G03260.1 length:2100
ATGGATAATA ATGGTGGTGG GAGCTCAGGC AATGAACAAT ACACTTCCGG | 50 |
AGACGCCAAG CAAAATGGGA AGAGGACTTG TCATCGCCAT ACCCCTCAAC | 100 |
AGATCCAAAG ACTTGAAGCT TATTTCAAGG AATGTCCCCA TCCTGACGAA | 150 |
AGACAACGAA ACCAATTATG TCGAGAGCTG AAACTCGAGC CTGACCAAAT | 200 |
CAAGTTTTGG TTTCAGAACA AGCGAACTCA GAGCAAAACT CAAGAAGATA | 250 |
GATCCACTAA CGTATTACTT CGTGGAGAAA ACGAGACTCT CCAAAGTGAC | 300 |
AACGAGGCAA TGCTCGATGC ATTAAAAAGT GTGCTCTGTC CAGCTTGTGG | 350 |
AGGCCCTCCT TTTGGCAGAG AAGAACGCGG ACACAATCTC CAAAAACTGC | 400 |
GTTTCGAAAA CGCCCGCCTT AAAGATCACC GTGACAGAAT CTCCAATTTC | 450 |
GTAGACCAGC ACAAGCCCAA CGAACCAACC GTGGAGGACT CATTAGCTTA | 500 |
TGTTCCTAGC CTTGATCGCA TCTCGTACGG AATTAACGGA GGCAATATGT | 550 |
ACGAGCCATC TAGCTCATAT GGACCACCAA ATTTTCAAAT CATCCAACCA | 600 |
CGACCACTAG CCGAAACGGA TATGAGCCTG TTGTCTGAAA TCGCGGCAAG | 650 |
TGCGGTTGAA GAGCTCAAGC GGCTGTTTTT GGCTGAGGAA CAATTTTGGG | 700 |
TTAAGTCGTG TATCGACGAG ACTTATGTGA TTGATACAGA GAGCTATGAG | 750 |
AGGTTCTCGC ATGCAGTCAA ACATTTCAGC AGCACTACTG CTCATGTCGA | 800 |
GTCGTCCAAA GCTGTCACGG TGGTTCATGT AGAAGCGATA AACTTGATCC | 850 |
AAATGTTCTT AGATCCGGAA AAATGGAAAG AGCTTTTTCC AACGATTGTG | 900 |
AACAAGGCCA ACACAATTCA TGTGCTCGGA TCGGGGCTTC CTATAAGAGG | 950 |
AAACTGCAAT GTTTTGCAAG TGATGTGGGA GCAACTACAC ATTCTGTCGC | 1000 |
CACTAGTGCC AGCAAGGGAA TTCATGGTCG TCAGGTGCTG CCAAGAGATC | 1050 |
GAGAAAGGGA TCTGGATTAT TGCTGACGTG TCACACCGTG CTAACTTTGA | 1100 |
CTTTGGCAAT GCTGCTTGTT ACAAACGTCC TTCTGGTTGC CTCATCCAAG | 1150 |
CCTTGCCCGA TGCTCACTCC AAGGTAATGT GGATAGAGCA TGTGGAAGTG | 1200 |
GACCATAAAT TGGATACACA TAAGATCTAT AGAGATCTTT TAAGTGGCGG | 1250 |
GTCAGGCTAT GGAGCTAAGC GTTGGATCGT CACACTTGAG AGAATGTGTG | 1300 |
AGAGGATGGC TCTCTCCTCC ATCCAAACCC TTCCTCCAAG TGACCGGAGC | 1350 |
GAAGTCATAA CGACAGGAGA AGCAAGAAGG AGTGTAATGA AATTAGGTGA | 1400 |
GAGAATGGTG AAGAATTTCA ACGAAATGCT GACCATGTCC GGAAAAATTG | 1450 |
ACTTTCCGCA GCAGTCGAAA AATGGAGTGA GAGTCTCGAT TCGGATGAAC | 1500 |
ATTGAGGCCG GTCAACCACC CGGTATAGTT GTCAGTGCTT CGTCTTCTCT | 1550 |
CGCAATCCCT CTCACTCCTT TGCAAGTCTT CGCTTTCCTT CAAAACCTCG | 1600 |
ACACTCGTCA ACAGTGGGAC ATTCTTTCCT ATGGAACCGT AGTCAATGAG | 1650 |
ATCGCTCGCA TTGTCACCGG GTCAAGTGAA ACCAACTGCG TTACCATTCT | 1700 |
CCGGGTACAT CCAACGCACG AAGAGAATAA TGACAAGATG GTGGTTCAAG | 1750 |
ACTCATGCAA GGATGATATG TTGATGCTGC AAGACTGCTA CATGGACGCC | 1800 |
TTGGGAGGCA TGATCGTGTA CGCTCCTATG GACATGGCTA CAATGCATTT | 1850 |
CGCTGTCTCC GGCGAAGTAG ACCCTTCCCA TATCCCAATC CTTCCATCTG | 1900 |
GTTTCGTCAT CTCAAGCGAC GGCAGGCGAT CCACGGTGGA GGACGGTGGA | 1950 |
ACCTTACTCA CGGTGGCCTT TCAGATCCTT GTCTCTGGAA AGGCCAATAG | 2000 |
GTCGAGAGAG GTGAATGAGA AGTCGGTGGA CACAGTGAGT GCTTTGATCA | 2050 |
GCTCCACTAT TCAAAGGATC AAAGGTTTGC TCAATTGTCC TGAATGTTGA | 2100 |
>AT3G03260.1 longest ORF length:699
MDNNGGGSSG NEQYTSGDAK QNGKRTCHRH TPQQIQRLEA YFKECPHPDE | 50 |
RQRNQLCREL KLEPDQIKFW FQNKRTQSKT QEDRSTNVLL RGENETLQSD | 100 |
NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF | 150 |
VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP | 200 |
RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE | 250 |
RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV | 300 |
NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI | 350 |
EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV | 400 |
DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS | 450 |
EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN | 500 |
IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE | 550 |
IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA | 600 |
LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG | 650 |
TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC | 700 |