Locus |
Common name |
Short description |
AT3G03450 |
RGL2 |
RGA-like 2 (.1) |
>AT3G03450.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AflII, AhdI, AlwI, AlwNI, ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrGI, BssHII, BssSI, BstAPI, BstEII, BstXI, BstZ17I, Bsu36I, BtsI, ClaI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MlyI, MnlI, MscI, MslI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmlI, PspOMI, PstI, PvuII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SspI, StuI, SwaI, Tsp45I, Tth111I, XcmI, XmaI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
598, 611, 625, 727, 846, 1504, 1602 |
AccIII(BspMII)
| T|CCGGA |
61 |
AciI
| C|CGC |
29, 968, 1065, 1470 |
AclI
| AA|CGTT |
1396 |
AfeI
| AGC|GCT |
1290 |
AflIII
| A|CPuPyGT |
612 |
AgeI
| A|CCGGT |
1157 |
AluI
| AG|CT |
49, 132, 192, 309, 436, 592, 637, 643, 832, 910, 916, 1015, 1149, 1188, 1207, 1307 |
Aor51HI(Eco47III)
| AGC|GCT |
1290 |
ApoI
| Pu|AATTPy |
981, 1045, 1051 |
AvaI
| C|PyCGPuG |
1305 |
AvaII
| G|G[AT]CC |
69, 496, 933, 963, 1414 |
BamHI
| G|GATCC |
27, 452 |
BanII
| GPuGCPy|C |
1150 |
BfaI
| C|TAG |
438, 548, 827, 1500 |
BlpI
| GC|TNAGC |
1062 |
BsaAI
| PyAC|GTPu |
663 |
BsaJI
| C|CNNGG |
500, 680, 1622 |
BsaWI
| [AT]|CCGG[AT] |
61, 526, 955, 1157, 1174, 1546 |
BsiEI
| CGPuPy|CG |
1419 |
BsiHKAI
| G[AT]GC[AT]|C |
505, 1150 |
BslI
| CCNNNNN|NNGG |
1627 |
BsoBI
| C|PyCGPuG |
1305 |
Bsp1286I
| G[GAT]GC[CAT]|C |
505, 1150 |
BspEI
| T|CCGGA |
61 |
BsrBI
| GAG|CGG |
1429 |
BsrDI
| GCAATGNN| |
893 |
BsrFI
| Pu|CCGGPy |
1157 |
BsrI
| ACTGGN| |
287 |
BssKI
| |CCNGG |
320, 390, 575, 927 |
BstBI
| TT|CGAA |
748, 1048, 1102 |
BstF5I
| GGATGNN| |
127, 888, 1464, 1580 |
BstNI
| CC|[AT]GG |
575 |
BstUI
| CG|CG |
598, 611, 625, 727, 846, 1504, 1602 |
BstYI
| Pu|GATCPy |
27, 333, 364, 452, 1083, 1498 |
BtgI
| C|CPuPyGG |
500 |
BtrI
| CAC|GTC |
859 |
Cac8I
| GCN|NGC |
299, 439, 556, 897, 909 |
Cfr10I
| [AG]|CCGG[TC] |
1157 |
DdeI
| C|TNAG |
169, 307, 378, 517, 562, 590, 1027, 1061, 1069, 1127, 1376 |
DpnI
| GA-CH3|TC |
26, 162, 275, 332, 363, 374, 451, 462, 1082, 1170, 1418, 1497 |
DpnII
| |GATC |
26, 162, 275, 332, 363, 374, 451, 462, 1082, 1170, 1418, 1497 |
DraI
| TTT|AAA |
1510 |
EcoO109I
| PuG|GNCCPy |
70 |
EcoRI
| G|AATTC |
981, 1045, 1051 |
Fnu4HI
| GC|NGC |
442, 729, 1065, 1404, 1430, 1443 |
HaeII
| PuGCGC|Py |
1290 |
HaeIII
| GG|CC |
894 |
HhaI
| GCG|C |
558, 599, 726, 845, 1289, 1503 |
HinP1I
| G|CGC |
558, 599, 726, 845, 1289, 1503 |
HincII
| GTPy|PuAC |
489, 511 |
HindIII
| A|AGCTT |
193, 911, 1189 |
HinfI
| G|ANTC |
252, 457, 474, 486, 513, 569, 581, 777, 824, 958, 987, 1116, 1261, 1317, 1346, 1457, 1487 |
HpaII
| C|CGG |
60, 320, 389, 525, 927, 954, 1156, 1173, 1545 |
Hpy188I
| TCN|GA |
168, 273, 306, 330, 366, 379, 454, 460, 480, 922, 961, 984, 1028, 1080, 1119, 1365, 1416, 1460, 1495 |
Hpy99I
| CG[AT]CG| |
478, 687, 841, 940 |
HpyCH4III
| ACN|GT |
240, 697, 998, 1200, 1230, 1330, 1448 |
HpyCH4IV
| A|CGT |
662, 720, 858, 1395 |
HpyCH4V
| TG|CA |
765, 888, 906, 1444 |
MboI
| |GATC |
26, 162, 275, 332, 363, 374, 451, 462, 1082, 1170, 1418, 1497 |
MluI
| A|CGCGT |
612 |
MseI
| T|TAA |
245, 876, 902, 1134, 1203, 1212, 1509, 1583 |
MspA1I
| C[AC]G|C[GT]G |
1067, 1472 |
MspI
| C|CGG |
60, 320, 389, 525, 927, 954, 1156, 1173, 1545 |
MwoI
| GCNNNNN|NNGC |
183, 308, 552, 819, 1023, 1532 |
N.BstNBI
| GAGTCNNNN|N |
491, 782, 1351 |
NciI
| CC|[CG]GG |
320, 390, 927 |
NheI
| G|CTAGC |
439 |
NlaIII
| CATG| |
21, 121, 298, 1033 |
NlaIV
| GGN|NCC |
27, 452, 1414 |
NspI
| PuCATG|Py |
299 |
PaeR7I
| C|TCGAG |
1305 |
PmeI
| GTTT|AAAC |
1511 |
PpuMI
| PuG|G[AT]CCPy |
70 |
PshAI
| GACNN|NNGTC |
939 |
PsiI
| TTA|TAA |
264 |
PspGI
| |CC[AT]GG |
575 |
PvuI
| CGAT|CG |
1419 |
RsaI
| GT|AC |
1372 |
RsrII
| CG|G[AT]CCG |
497 |
SacI
| GAGCT|C |
1150 |
Sau3AI
| |GATC |
26, 162, 275, 332, 363, 374, 451, 462, 1082, 1170, 1418, 1497 |
Sau96I
| G|GNCC |
69, 496, 933, 963, 1414 |
ScrFI
| CC|NGG |
320, 390, 575, 927 |
SmlI
| C|TPyPuAG |
205, 635, 674, 1305 |
SnaBI
| TAC|GTA |
663 |
SpeI
| A|CTAGT |
549 |
SphI
| GCATG|C |
299 |
StyI
| C|C[AT][AT]GG |
680 |
Taqƒ¿I
| T|CGA |
160, 291, 747, 1047, 1101, 1182, 1272, 1304, 1323, 1425 |
TfiI
| G|A[AT]TC |
474, 569, 581, 824, 958, 987, 1116, 1261, 1457, 1487 |
TliI
| C|TCGAG |
1305 |
TseI
| G|C[AT]GC |
442, 1443 |
Tsp509I
| |AATT |
385, 980, 1011, 1020, 1044, 1050, 1136 |
TspRI
| NNCA[CG]TGNN| |
1451 |
XbaI
| T|CTAGA |
828 |
XhoI
| C|TCGAG |
1305 |
XmnI
| GAANN|NNTTC |
1190, 1292 |
Click here to view TAIR data
>AT3G03450.1 length:1644
ATGAAGAGAG GATACGGAGA AACATGGGAT CCGCCACCAA AACCACTACC | 50 |
AGCTTCTCGT TCCGGAGAAG GTCCTTCAAT GGCGGATAAG AAGAAGGCTG | 100 |
ATGATGACAA CAACAACAGC AACATGGATG ATGAGCTTCT TGCTGTTCTT | 150 |
GGCTACAAGG TTCGATCTTC TGAGATGGCT GAAGTAGCAC AGAAGCTTGA | 200 |
ACAACTTGAG ATGGTCTTGT CTAATGATGA TGTTGGTTCT ACTGTCTTAA | 250 |
ACGACTCTGT TCATTATAAC CCATCTGATC TCTCTAACTG GGTCGAGAGC | 300 |
ATGCTTTCTG AGCTGAACAA CCCGGCTTCT TCGGATCTTG ACACGACCCG | 350 |
AAGTTGTGTG GATAGATCCG AATACGATCT CAGAGCAATT CCGGGTCTTT | 400 |
CTGCGTTTCC AAAGGAAGAG GAAGTCTTTG ACGAGGAAGC TAGCAGCAAG | 450 |
AGGATCCGAC TCGGATCGTG GTGCGAATCG TCGGACGAGT CAACTCGGTC | 500 |
CGTGGTGCTC GTTGACTCTC AGGAGACCGG AGTTAGACTT GTCCACGCAC | 550 |
TAGTGGCGTG CGCTGAGGCG ATTCACCAGG AGAATCTCAA CTTAGCTGAC | 600 |
GCGCTGGTGA AACGCGTGGG AACACTCGCG GGTTCTCAAG CTGGAGCTAT | 650 |
GGGAAAAGTC GCTACGTATT TTGCTCAAGC CTTGGCTCGT CGTATTTACC | 700 |
GTGATTACAC GGCGGAGACG GACGTTTGCG CGGCGGTGAA CCCATCTTTC | 750 |
GAAGAGGTTT TGGAGATGCA CTTTTACGAG TCTTGCCCTT ACCTGAAGTT | 800 |
CGCTCATTTC ACGGCGAACC AAGCGATTCT AGAAGCTGTT ACGACGGCGC | 850 |
GTAGAGTTCA CGTCATTGAT TTAGGGCTTA ATCAAGGGAT GCAATGGCCT | 900 |
GCTTTAATGC AAGCTTTAGC TCTCCGACCC GGTGGACCTC CGTCGTTTCG | 950 |
TCTCACCGGA ATCGGACCAC CGCAGACGGA GAATTCAGAT TCGCTTCAAC | 1000 |
AGTTAGGTTG GAAATTAGCT CAATTCGCTC AGAACATGGG CGTTGAATTC | 1050 |
GAATTCAAAG GCTTAGCCGC TGAGAGTTTA TCGGATCTTG AACCCGAAAT | 1100 |
GTTCGAAACC CGACCCGAAT CTGAAACCTT AGTGGTTAAT TCGGTATTTG | 1150 |
AGCTCCACCG GTTATTAGCC CGATCCGGTT CAATCGAAAA GCTTCTCAAT | 1200 |
ACGGTTAAAG CTATTAAACC GAGTATCGTA ACGGTGGTTG AGCAAGAAGC | 1250 |
GAACCACAAC GGAATCGTCT TCCTCGATAG GTTCAACGAA GCGCTTCATT | 1300 |
ACTACTCGAG CTTGTTTGAC TCGCTCGAAG ACAGTTATAG TTTACCGAGT | 1350 |
CAAGACCGAG TTATGTCAGA AGTGTACTTA GGGAGACAGA TACTCAACGT | 1400 |
TGTTGCGGCG GAAGGGTCCG ATCGGGTCGA GCGGCACGAG ACGGCTGCAC | 1450 |
AGTGGAGGAT TCGGATGAAA TCCGCTGGGT TTGACCCGAT TCATCTCGGA | 1500 |
TCTAGCGCGT TTAAACAAGC GAGTATGCTT TTATCGCTTT ACGCTACCGG | 1550 |
AGATGGATAC AGAGTTGAAG AAAATGACGG ATGTTTAATG ATAGGGTGGC | 1600 |
AGACGCGACC ACTCATCACA ACCTCGGCGT GGAAACTCGC CTGA | 1650 |
>AT3G03450.1 longest ORF length:547
MKRGYGETWD PPPKPLPASR SGEGPSMADK KKADDDNNNS NMDDELLAVL | 50 |
GYKVRSSEMA EVAQKLEQLE MVLSNDDVGS TVLNDSVHYN PSDLSNWVES | 100 |
MLSELNNPAS SDLDTTRSCV DRSEYDLRAI PGLSAFPKEE EVFDEEASSK | 150 |
RIRLGSWCES SDESTRSVVL VDSQETGVRL VHALVACAEA IHQENLNLAD | 200 |
ALVKRVGTLA GSQAGAMGKV ATYFAQALAR RIYRDYTAET DVCAAVNPSF | 250 |
EEVLEMHFYE SCPYLKFAHF TANQAILEAV TTARRVHVID LGLNQGMQWP | 300 |
ALMQALALRP GGPPSFRLTG IGPPQTENSD SLQQLGWKLA QFAQNMGVEF | 350 |
EFKGLAAESL SDLEPEMFET RPESETLVVN SVFELHRLLA RSGSIEKLLN | 400 |
TVKAIKPSIV TVVEQEANHN GIVFLDRFNE ALHYYSSLFD SLEDSYSLPS | 450 |
QDRVMSEVYL GRQILNVVAA EGSDRVERHE TAAQWRIRMK SAGFDPIHLG | 500 |
SSAFKQASML LSLYATGDGY RVEENDGCLM IGWQTRPLIT TSAWKLA | 550 |
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