Locus |
Common name |
Short description |
AT3G03660 |
WOX11 |
WUSCHEL related homeobox 11 (.1.2) |
>AT3G03660.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BamHI, BanI, BanII, BbsI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstXI, BstYI, BstZ17I, BtgI, BtrI, BtsI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PspOMI, PvuI, RsaI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, Tth111I, XbaI, XcmI, XmaI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
211 |
AciI
| C|CGC |
31, 57 |
AclI
| AA|CGTT |
681 |
AgeI
| A|CCGGT |
84 |
AluI
| AG|CT |
282, 295, 353, 425, 520, 548, 758, 775 |
ApoI
| Pu|AATTPy |
205 |
AvaI
| C|PyCGPuG |
199 |
AvaII
| G|G[AT]CC |
2, 91, 262 |
BalI
| TGG|CCA |
501 |
BbvCI
| CC|TCAGC |
75 |
BclI
| T|GATCA |
582 |
BfaI
| C|TAG |
423 |
BsaWI
| [AT]|CCGG[AT] |
64, 84, 111 |
BslI
| CCNNNNN|NNGG |
611 |
BsoBI
| C|PyCGPuG |
199 |
Bsp1286I
| G[GAT]GC[CAT]|C |
573 |
BspDI
| AT|CGAT |
564 |
BsrFI
| Pu|CCGGPy |
84, 251 |
BssKI
| |CCNGG |
785 |
BstEII
| G|GTNACC |
102 |
BstF5I
| GGATGNN| |
452 |
BstNI
| CC|[AT]GG |
785 |
BstUI
| CG|CG |
211 |
Bsu36I
| CC|TNAGG |
714 |
Cac8I
| GCN|NGC |
424 |
Cfr10I
| [AG]|CCGG[TC] |
84, 251 |
ClaI
| AT|CGAT |
564 |
DdeI
| C|TNAG |
74, 713 |
DpnI
| GA-CH3|TC |
136, 581 |
DpnII
| |GATC |
136, 581 |
EaeI
| Py|GGCCPu |
501 |
EcoO109I
| PuG|GNCCPy |
263 |
Fnu4HI
| GC|NGC |
291, 297, 303 |
HaeIII
| GG|CC |
500 |
HhaI
| GCG|C |
210 |
HinP1I
| G|CGC |
210 |
HincII
| GTPy|PuAC |
157 |
HindIII
| A|AGCTT |
776 |
HinfI
| G|ANTC |
132, 482 |
HpaI
| GTT|AAC |
157 |
HpaII
| C|CGG |
63, 83, 110, 250 |
Hpy188I
| TCN|GA |
269, 579, 641 |
Hpy99I
| CG[AT]CG| |
267 |
HpyCH4III
| ACN|GT |
145, 177, 621 |
HpyCH4IV
| A|CGT |
680 |
HpyCH4V
| TG|CA |
223, 292, 298, 705, 753 |
MboI
| |GATC |
136, 581 |
MscI
| TGG|CCA |
501 |
MseI
| T|TAA |
156, 488 |
MslI
| CAPyNN|NNPuTG |
368 |
MspA1I
| C[AC]G|C[GT]G |
296, 305 |
MspI
| C|CGG |
63, 83, 110, 250 |
MwoI
| GCNNNNN|NNGC |
31, 297, 309, 472 |
N.BstNBI
| GAGTCNNNN|N |
137 |
NheI
| G|CTAGC |
424 |
NlaIII
| CATG| |
475, 515, 670, 767, 801 |
NlaIV
| GGN|NCC |
67, 92, 263, 789 |
NsiI
| ATGCA|T |
754 |
PaeR7I
| C|TCGAG |
199 |
PpuMI
| PuG|G[AT]CCPy |
263 |
PsiI
| TTA|TAA |
629 |
PspGI
| |CC[AT]GG |
785 |
PstI
| CTGCA|G |
293, 299 |
PvuII
| CAG|CTG |
296 |
Sau3AI
| |GATC |
136, 581 |
Sau96I
| G|GNCC |
2, 91, 262 |
ScrFI
| CC|NGG |
785 |
SfcI
| C|TPuPyAG |
286, 293, 299 |
SmlI
| C|TPyPuAG |
130, 199 |
Taqƒ¿I
| T|CGA |
134, 198, 563 |
TfiI
| G|A[AT]TC |
482 |
TliI
| C|TCGAG |
199 |
TseI
| G|C[AT]GC |
291, 297, 303 |
Tsp45I
| |GT[CG]AC |
101, 328, 558, 651 |
Tsp509I
| |AATT |
204, 410, 593 |
TspRI
| NNCA[CG]TGNN| |
148 |
XhoI
| C|TCGAG |
199 |
XmnI
| GAANN|NNTTC |
86 |
Click here to view TAIR data
>AT3G03660.1 length:807
ATGGACCAAG AACAAACACC ACATAGCCCA ACCCGCCATA GTCGCTCACC | 50 |
CCCATCCTCC GCCTCCGGTT CCACCTCAGC AGAACCGGTT CGGTCCCGAT | 100 |
GGTCACCTAA ACCGGAACAA ATACTCATAC TTGAGTCGAT CTTCCACAGT | 150 |
GGTATGGTTA ACCCTCCCAA AGAAGAGACG GTAAGGATAA GAAAGATGCT | 200 |
CGAGAAATTT GGCGCGGTGG GAGATGCAAA TGTCTTCTAT TGGTTTCAAA | 250 |
ACCGGCGGTC AAGGTCCCGT CGGAGACAGC GACAGCTACA GGCTGCAGCT | 300 |
GCAGCAGCGG ACGCAACCAC CAACACTTGT GACCAGACTA TGATGGTGAG | 350 |
CAACAGCTTA CCACATCATA GTGGGAGTGA TTTGGGGTTT GGAGGTTGTA | 400 |
GCACTTCTTC TAATTACTTA TTTGCTAGCT CTTCTTCTTC TTATGGTGGT | 450 |
GGATGTGATA ATCAAAGCAA TAGTGGCATG GAGAATCTCT TAACAATGTC | 500 |
TGGCCAAATG AGTTACCATG AAGCTACTCA TCATCATTAT CAAAATCATA | 550 |
GCTCAAATGT CACATCGATT TTGTGCCCAT CTGATCAAAA CTCCAATTTT | 600 |
CAATACCAAC AAGGGGCTAT AACGGTGTTT ATAAACGGAG TTCCGACAGA | 650 |
AGTGACGAGA GGAGGAATAG ACATGAAAGC AACGTTTGGA GAAGATTTGG | 700 |
TTTTGGTGCA TTCCTCAGGT GTTCCTCTTC CTACTGATGA GTTTGGTTTT | 750 |
TTGATGCATA GCTTACAACA TGGTGAAGCT TATTTCCTGG TTCCAAGACA | 800 |
GACATGA | 850 |
>AT3G03660.1 longest ORF length:268
MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS | 50 |
GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA | 100 |
AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG | 150 |
GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF | 200 |
QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF | 250 |
LMHSLQHGEA YFLVPRQT | 300 |
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