Locus |
Common name |
Short description |
AT3G03660 |
WOX11 |
WUSCHEL related homeobox 11 (.1.2) |
>AT3G03660.2 CDS map
>>Show genomic map
![](/fiore/public_db/temp/temp21928371821637123.png)
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BamHI, BanI, BanII, BbsI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstXI, BstYI, BstZ17I, BtgI, BtrI, BtsI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PspOMI, PvuI, RsaI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, Tth111I, XbaI, XcmI, XmaI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
211 |
AciI
| C|CGC |
31, 57 |
AclI
| AA|CGTT |
768 |
AgeI
| A|CCGGT |
84 |
AluI
| AG|CT |
282, 295, 353, 485, 508, 512, 607, 635, 845, 862 |
ApoI
| Pu|AATTPy |
205 |
AvaI
| C|PyCGPuG |
199 |
AvaII
| G|G[AT]CC |
2, 91, 262 |
BalI
| TGG|CCA |
588 |
BbvCI
| CC|TCAGC |
75 |
BclI
| T|GATCA |
669 |
BfaI
| C|TAG |
510 |
BsaWI
| [AT]|CCGG[AT] |
64, 84, 111 |
BslI
| CCNNNNN|NNGG |
698 |
BsoBI
| C|PyCGPuG |
199 |
Bsp1286I
| G[GAT]GC[CAT]|C |
660 |
BspDI
| AT|CGAT |
651 |
BsrFI
| Pu|CCGGPy |
84, 251 |
BssKI
| |CCNGG |
872 |
BstEII
| G|GTNACC |
102 |
BstF5I
| GGATGNN| |
539 |
BstNI
| CC|[AT]GG |
872 |
BstUI
| CG|CG |
211 |
Bsu36I
| CC|TNAGG |
801 |
Cac8I
| GCN|NGC |
511 |
Cfr10I
| [AG]|CCGG[TC] |
84, 251 |
ClaI
| AT|CGAT |
651 |
DdeI
| C|TNAG |
74, 800 |
DpnI
| GA-CH3|TC |
136, 668 |
DpnII
| |GATC |
136, 668 |
EaeI
| Py|GGCCPu |
588 |
EcoO109I
| PuG|GNCCPy |
263 |
Fnu4HI
| GC|NGC |
291, 297, 303 |
HaeIII
| GG|CC |
587 |
HhaI
| GCG|C |
210 |
HinP1I
| G|CGC |
210 |
HincII
| GTPy|PuAC |
157 |
HindIII
| A|AGCTT |
863 |
HinfI
| G|ANTC |
132, 569 |
HpaI
| GTT|AAC |
157 |
HpaII
| C|CGG |
63, 83, 110, 250 |
Hpy188I
| TCN|GA |
269, 666, 728 |
Hpy99I
| CG[AT]CG| |
267 |
HpyCH4III
| ACN|GT |
145, 177, 708 |
HpyCH4IV
| A|CGT |
767 |
HpyCH4V
| TG|CA |
223, 292, 298, 792, 840 |
MboI
| |GATC |
136, 668 |
MscI
| TGG|CCA |
588 |
MseI
| T|TAA |
156, 575 |
MslI
| CAPyNN|NNPuTG |
368 |
MspA1I
| C[AC]G|C[GT]G |
296, 305 |
MspI
| C|CGG |
63, 83, 110, 250 |
MwoI
| GCNNNNN|NNGC |
31, 297, 309, 559 |
N.BstNBI
| GAGTCNNNN|N |
137 |
NheI
| G|CTAGC |
511 |
NlaIII
| CATG| |
562, 602, 757, 854, 888 |
NlaIV
| GGN|NCC |
67, 92, 263, 876 |
NsiI
| ATGCA|T |
841 |
PaeR7I
| C|TCGAG |
199 |
PpuMI
| PuG|G[AT]CCPy |
263 |
PsiI
| TTA|TAA |
716 |
PspGI
| |CC[AT]GG |
872 |
PstI
| CTGCA|G |
293, 299 |
PvuII
| CAG|CTG |
296 |
Sau3AI
| |GATC |
136, 668 |
Sau96I
| G|GNCC |
2, 91, 262 |
ScrFI
| CC|NGG |
872 |
SfcI
| C|TPuPyAG |
286, 293, 299 |
SmlI
| C|TPyPuAG |
130, 199, 434 |
Taqƒ¿I
| T|CGA |
134, 198, 650 |
TfiI
| G|A[AT]TC |
569 |
TliI
| C|TCGAG |
199 |
TseI
| G|C[AT]GC |
291, 297, 303 |
Tsp45I
| |GT[CG]AC |
101, 328, 645, 738 |
Tsp509I
| |AATT |
204, 410, 680 |
TspRI
| NNCA[CG]TGNN| |
148 |
XhoI
| C|TCGAG |
199 |
XmnI
| GAANN|NNTTC |
86 |
Click here to view TAIR data
>AT3G03660.2 length:894
ATGGACCAAG AACAAACACC ACATAGCCCA ACCCGCCATA GTCGCTCACC | 50 |
CCCATCCTCC GCCTCCGGTT CCACCTCAGC AGAACCGGTT CGGTCCCGAT | 100 |
GGTCACCTAA ACCGGAACAA ATACTCATAC TTGAGTCGAT CTTCCACAGT | 150 |
GGTATGGTTA ACCCTCCCAA AGAAGAGACG GTAAGGATAA GAAAGATGCT | 200 |
CGAGAAATTT GGCGCGGTGG GAGATGCAAA TGTCTTCTAT TGGTTTCAAA | 250 |
ACCGGCGGTC AAGGTCCCGT CGGAGACAGC GACAGCTACA GGCTGCAGCT | 300 |
GCAGCAGCGG ACGCAACCAC CAACACTTGT GACCAGACTA TGATGGTGAG | 350 |
CAACAGCTTA CCACATCATA GTGGGAGTGA TTTGGGGTTT GGAGGTTGTA | 400 |
GCACTTCTTC TAATTACTTA TTTGGTGGGT CATCTCAAGT TCCTTCCTTT | 450 |
TTTCTTGGTC TCTCTTCTTC TCCTTCTTCT TGTTCAAGCT CCTCTTCCAC | 500 |
TTCTTCTTCA GCTAGCTCTT CTTCTTCTTA TGGTGGTGGA TGTGATAATC | 550 |
AAAGCAATAG TGGCATGGAG AATCTCTTAA CAATGTCTGG CCAAATGAGT | 600 |
TACCATGAAG CTACTCATCA TCATTATCAA AATCATAGCT CAAATGTCAC | 650 |
ATCGATTTTG TGCCCATCTG ATCAAAACTC CAATTTTCAA TACCAACAAG | 700 |
GGGCTATAAC GGTGTTTATA AACGGAGTTC CGACAGAAGT GACGAGAGGA | 750 |
GGAATAGACA TGAAAGCAAC GTTTGGAGAA GATTTGGTTT TGGTGCATTC | 800 |
CTCAGGTGTT CCTCTTCCTA CTGATGAGTT TGGTTTTTTG ATGCATAGCT | 850 |
TACAACATGG TGAAGCTTAT TTCCTGGTTC CAAGACAGAC ATGA | 900 |
>AT3G03660.2 longest ORF length:297
MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS | 50 |
GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA | 100 |
AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FGGSSQVPSF | 150 |
FLGLSSSPSS CSSSSSTSSS ASSSSSYGGG CDNQSNSGME NLLTMSGQMS | 200 |
YHEATHHHYQ NHSSNVTSIL CPSDQNSNFQ YQQGAITVFI NGVPTEVTRG | 250 |
GIDMKATFGE DLVLVHSSGV PLPTDEFGFL MHSLQHGEAY FLVPRQT | 300 |
|