fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G04030 Homeodomain-like superfamily protein (.1.2.3)

>AT3G04030.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 156, 1107
EcoRI G|AATTC 429
HindIII A|AGCTT 1060
PvuII CAG|CTG 599, 1173
SacI GAGCT|C 892
SpeI A|CTAGT 636
StyI C|C[AT][AT]GG 21


Click here to view TAIR data

>AT3G04030.3 length:1185
ATGTATTACC AAAACCAGCA CCAAGGAAAG AACATCCTCT CATCTTCAAG 
50
AATGCATATA ACTTCTGAAA GGCATCCATT CCTTAGAGGG AATAGTCCAG 
100
GTGATTCTGG ACTTATCCTA TCAACCGATG CAAAGCCACG CCTAAAATGG 
150
ACTCCAGATC TTCATGAGAG ATTCATTGAA GCAGTCAATC AACTCGGTGG 
200
AGCAGATAAA GCTACTCCTA AGACAATCAT GAAAGTCATG GGGATTCCAG 
250
GCCTTACCTT ATACCATCTC AAAAGTCATC TTCAGAAATA CAGGCTGAGC 
300
AAGAATCTCA ACGGACAAGC TAACAACAGC TTCAACAAAA TAGGTATAAT 
350
GACCATGATG GAAGAAAAGA CTCCTGATGC AGACGAAATT CAAAGCGAGA 
400
ATTTAAGCAT TGGACCACAG CCAAACAAGA ATTCACCAAT AGGTGAAGCA 
450
CTGCAAATGC AAATAGAGGT CCAAAGAAGG CTTCATGAGC AACTTGAGGT 
500
ACAGCGACAT TTGCAGCTTA GGATAGAGGC TCAAGGGAAG TACCTGCAAT 
550
CGGTTTTGGA GAAAGCACAA GAGACTCTTG GAAGACAGAA CCTCGGTGCA 
600
GCTGGGATCG AAGCTGCCAA AGTTCAACTC TCGGAACTAG TATCTAAAGT 
650
ATCAGCAGAG TACCCAAACT CTAGTTTCCT AGAACCAAAA GAACTTCAAA 
700
ACCTATGCTC ACAACAGATG CAAACAAACT ATCCACCTGA TTGCTCTCTT 
750
GAAAGTTGCC TGACCTCAAG CGAGGGAACG CAGAAAAACT CGAAAATGCT 
800
AGAGAACAAC AGATTAGGAC TAAGAACGTA TATTGGTGAT TCAACATCGG 
850
AGCAGAAAGA GATTATGGAA GAACCATTGT TCCAAAGAAT GGAGCTCACA 
900
TGGACAGAAG GTCTAAGAGG GAATCCATAT CTTTCAACAA TGGTGAGTGA 
950
AGCAGAACAA AGAATCTCAT ATTCAGAAAG AAGTCCAGGT AGATTATCAA 
1000
TAGGAGTAGG ATTGCACGGA CACAAAAGCC AACATCAACA AGGCAACAAT 
1050
GAGGATCATA AGCTTGAAAC ACGAAACCGG AAAGGCATGG ATTCAACAAC 
1100
AGAGCTAGAT CTCAACACAC ATGTTGAAAA CTATTGTACA ACGCGTACGA 
1150
AACAGTTCGA CTTGAATGGT TTCAGCTGGA ACTGA
1200

>AT3G04030.3 longest ORF length:394
MYYQNQHQGK NILSSSRMHI TSERHPFLRG NSPGDSGLIL STDAKPRLKW 
50
TPDLHERFIE AVNQLGGADK ATPKTIMKVM GIPGLTLYHL KSHLQKYRLS 
100
KNLNGQANNS FNKIGIMTMM EEKTPDADEI QSENLSIGPQ PNKNSPIGEA 
150
LQMQIEVQRR LHEQLEVQRH LQLRIEAQGK YLQSVLEKAQ ETLGRQNLGA 
200
AGIEAAKVQL SELVSKVSAE YPNSSFLEPK ELQNLCSQQM QTNYPPDCSL 
250
ESCLTSSEGT QKNSKMLENN RLGLRTYIGD STSEQKEIME EPLFQRMELT 
300
WTEGLRGNPY LSTMVSEAEQ RISYSERSPG RLSIGVGLHG HKSQHQQGNN 
350
EDHKLETRNR KGMDSTTELD LNTHVENYCT TRTKQFDLNG FSWN
400